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contig_metadata

20 rows where bioproject = "PRJNA572587", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 20 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 20 ✖

bioproject 1

  • PRJNA572587 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3109908 3109908 PRJNA572587_P_NODE_3423_length_707_cov_2.784195_g3147_i0 PRJNA572587 3423 707 2.784195 19.68425865 Rariglobus sp. 2706526 Bacteria Bacteria 147 2.65e-36   NR HEY8933051.1 2706526 g3147 i0 53.9 1.28995756718529 152 65 62.8 3 699 256 586 736 HEY8933051.1 AAA family ATPase [Rariglobus sp.] diamond 912 147 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Rariglobus Rariglobus sp.
5662364 5662364 PRJNA572587_P_NODE_10205_length_371_cov_30.354037_g9878_i0 PRJNA572587 10205 371 30.354037 112.61347727 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 414 3.91e-111   NTclustered gi|2874253690|emb|OY969416.1| 412056 g9878 i0 90.252 99.7870619946092 318 29 85 2 3 319 1316737 1316421 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 blastn 37021 414 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
8211617 8211617 PRJNA572587_P_NODE_10007_length_376_cov_2.113150_g9680_i0 PRJNA572587 10007 376 2.11315 7.945444 Fontisphaera persica 2974023 Bacteria Bacteria 278 5.4300000000000006e-70   NTclustered gi|2439237958|gb|CP116615.1| 2974023 g9680 i0 86.853 64.9601063829787 251 29 66 4 127 376 3863933 3863686 Fontisphaera persica strain B-154 chromosome, complete genome blastn 24425 278 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Limisphaerales Fontisphaeraceae Fontisphaera Fontisphaera persica
8211744 8211744 PRJNA572587_P_NODE_1647_length_992_cov_12.179215_g1491_i0 PRJNA572587 1647 992 12.179215 120.8178128 Cerasicoccus maritimus 490089 Bacteria Bacteria 58.9 1.01e-5   NR WP_309398316.1 490089 g1491 i0 28.8 0.925403225806452 146 93 42.3 4 536 955 30 170 WP_309398316.1 hypothetical protein [Cerasicoccus maritimus] diamond 918 58.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Cerasicoccaceae Cerasicoccus Cerasicoccus maritimus
8212173 8212173 PRJNA572587_P_NODE_5347_length_544_cov_286.056566_g5027_i0 PRJNA572587 5347 544 286.056566 1556.14771904 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 667 0   NTclustered gi|2874253779|emb|OY969763.1| 412056 g5027 i0 90.173 94.8841911764706 519 41 94 10 1 514 3833087 3833600 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 blastn 51617 667 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
10763473 10763473 PRJNA572587_P_NODE_6109_length_501_cov_5.110619_g5788_i0 PRJNA572587 6109 501 5.110619 25.60420119 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 145 1.5499999999999996e-40   NR MBI4625648.1 2026799 g5788 i0 88 0.497005988023952 83 10 49.7 0 9 257 48 130 MBI4625648.1 DJ-1/PfpI family protein [Verrucomicrobiota bacterium] diamond 249 145 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
14588016 14588016 PRJNA572587_P_NODE_8892_length_403_cov_78.319209_g8565_i0 PRJNA572587 8892 403 78.319209 315.62641227 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 340 7.36e-89   NTclustered gi|2874253779|emb|OY969763.1| 412056 g8565 i0 87.097 56.6774193548387 310 29 74 5 82 380 3832143 3832452 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 blastn 22841 340 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
15861359 15861359 PRJNA572587_P_NODE_16613_length_280_cov_267.956710_g16285_i0 PRJNA572587 16613 280 267.95671 750.278788 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 294 3.88e-75   NTclustered gi|2874253779|emb|OY969763.1| 412056 g16285 i0 89.7 108.939285714286 233 20 82 4 21 250 3833369 3833600 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 blastn 30503 294 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
17136300 17136300 PRJNA572587_P_NODE_12654_length_327_cov_23.694245_g12326_i0 PRJNA572587 12654 327 23.694245 77.48018115 Pedosphaera parvula 1032527 Bacteria Bacteria 411 4.4e-110   NTclustered gi|183579829|emb|AM905426.1| 320771 g12326 i0 91.118 233.590214067278 304 25 93 2 22 325 768 1069 Bacterium Ellin514 23S rRNA gene, isolate Ellin514 blastn 76384 411 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Pedosphaerae Pedosphaerales Pedosphaeraceae Pedosphaera Pedosphaera parvula
26858384 26858384 PRJNA572587_P_NODE_8501_length_414_cov_76.786301_g8175_i0 PRJNA572587 8501 414 76.786301 317.89528614 Puniceicoccales bacterium 2478473 Bacteria Bacteria 42.4 0.0288   NR MDR0742450.1 2478473 g8175 i0 34.9 0.456521739130435 63 35 41.3 2 172 2 2 64 MDR0742450.1 hypothetical protein [Puniceicoccales bacterium] diamond 189 42.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales     Puniceicoccales bacterium
28942993 28942993 PRJNA572587_P_NODE_10008_length_376_cov_1.694190_g9681_i0 PRJNA572587 10008 376 1.69419 6.3701544 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 217 1.1999999999999998e-67   NR MBX9577730.1 2201154 g9681 i0 89 0.941489361702128 118 13 94.1 0 374 21 117 234 MBX9577730.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Chthoniobacterales bacterium] diamond 354 217 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
29384850 29384850 PRJNA572587_P_NODE_19009_length_261_cov_1.509434_g18681_i0 PRJNA572587 19009 261 1.509434 3.93962274 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 82.4 1.57e-17   NR NJR42023.1 2562705 g18681 i0 41.3 2.14942528735632 104 36 90.8 2 241 5 21 124 NJR42023.1 hypothetical protein [Akkermansiaceae bacterium] diamond 561 82.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
29636956 29636956 PRJNA572587_P_NODE_26590_length_217_cov_2.410714_g26262_i0 PRJNA572587 26590 217 2.410714 5.23124938 Prosthecobacter sp. 1965333 Bacteria Bacteria 48.5 2.33e-4   NR MEQ1747904.1 1965333 g26262 i0 70.3 0.511520737327189 37 11 51.2 0 79 189 7 43 MEQ1747904.1 thiamine pyrophosphate-dependent enzyme [Prosthecobacter sp.] diamond 111 48.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
30111072 30111072 PRJNA572587_P_NODE_30352_length_201_cov_32.013158_g30024_i0 PRJNA572587 30352 201 32.013158 64.34644758 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 104 1.12e-26   NR MBS0628409.1 2026799 g30024 i0 80 0.895522388059702 60 12 89.6 0 3 182 30 89 MBS0628409.1 disulfide bond formation protein B [Verrucomicrobiota bacterium] diamond 180 104 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30901075 30901075 PRJNA572587_P_NODE_33974_length_190_cov_1.042553_g33646_i0 PRJNA572587 33974 190 1.042553 1.9808507 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 51.6 5.26e-6   NR NJR42023.1 2562705 g33646 i0 52.5 0.631578947368421 40 19 63.2 0 187 68 124 163 NJR42023.1 hypothetical protein [Akkermansiaceae bacterium] diamond 120 51.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
31121776 31121776 PRJNA572587_P_NODE_30735_length_200_cov_11.158940_g30407_i0 PRJNA572587 30735 200 11.15894 22.31788 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 117 5.3e-29   NR MCX7713884.1 2201154 g30407 i0 100 0.84 56 0 84 0 3 170 95 150 MCX7713884.1 hypothetical protein [Chthoniobacterales bacterium] diamond 168 117 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
31375213 31375213 PRJNA572587_P_NODE_3076_length_746_cov_37.383070_g2818_i0 PRJNA572587 3076 746 37.38307 278.8777022 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 63.9 2.66e-9   NR NJR41398.1 2562705 g2818 i0 66 0.189008042895442 47 15 18.5 1 408 545 32 78 NJR41398.1 hypothetical protein [Akkermansiaceae bacterium] diamond 141 63.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
31976016 31976016 PRJNA572587_P_NODE_2158_length_881_cov_33.518029_g1965_i0 PRJNA572587 2158 881 33.518029 295.29383549 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 47.4 0.0133   NR PWU09965.1 2026799 g1965 i0 32 1.0522133938706 103 67 34.7 2 785 480 49 149 PWU09965.1 MAG: 30S ribosomal protein S7 [Verrucomicrobiota bacterium] diamond 927 47.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32514278 32514278 PRJNA572587_P_NODE_11579_length_344_cov_43.698305_g11252_i0 PRJNA572587 11579 344 43.698305 150.3221692 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 94 3.04e-20   NR HYG83408.1 2499141 g11252 i0 48.1 0.706395348837209 81 42 70.6 0 33 275 139 219 HYG83408.1 Kiwa anti-phage protein KwaB-like domain-containing protein [Verrucomicrobiia bacterium] diamond 243 94 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32716726 32716726 PRJNA572587_P_NODE_22120_length_240_cov_6.821990_g21792_i0 PRJNA572587 22120 240 6.8219900000000004 16.372776000000002 Bacteria 2 Bacteria Bacteria 85.9 2.16e-18   NR MCD6049068.1 2026799 g21792 i0 84.4 1.275 45 7 56.3 0 83 217 186 230 MCD6049068.1 Hydroxypyruvate isomerase [Verrucomicrobiota bacterium] diamond 306 86.7 0.990772779700115 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;