RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA572587" and tax_clade = "Candidatus Pacearchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Candidatus Pacearchaeota · 4 ✖

bioproject 1

  • PRJNA572587 · 4 ✖

analysis 1

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27932359 27932359 PRJNA572587_P_NODE_5325_length_546_cov_53.016097_g5005_i0 PRJNA572587 5325 546 53.016097 289.46788962 Candidatus Pacearchaeota archaeon CG1 2026773 Archaea Archaea 143 3.09e-39   NR PIN94646.1 1974437 g5005 i0 63.1 1.2032967032967 111 41 61 0 103 435 1 111 PIN94646.1 MAG: hypothetical protein COU53_02690 [Candidatus Pacearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_30_48] diamond 657 143 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_30_48
28753234 28753234 PRJNA572587_P_NODE_31887_length_196_cov_15.319728_g31559_i0 PRJNA572587 31887 196 15.319728 30.02666688 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 48.5 1.75e-4   NR MBS3083221.1 2026773 g31559 i0 81.5 1.30102040816327 27 5 41.3 0 94 174 25 51 MBS3083221.1 type II methionyl aminopeptidase [Candidatus Pacearchaeota archaeon] diamond 255 48.5 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30711404 30711404 PRJNA572587_P_NODE_8474_length_415_cov_21.158470_g8148_i0 PRJNA572587 8474 415 21.15847 87.8076505 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 73.9 6.23e-13   NR MEM3074540.1 2026773 g8148 i0 76.5 0.368674698795181 51 12 36.9 0 5 157 159 209 MEM3074540.1 glycosyltransferase family 2 protein [Candidatus Pacearchaeota archaeon] diamond 153 73.9 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30932638 30932638 PRJNA572587_P_NODE_40334_length_172_cov_7.918699_g40006_i0 PRJNA572587 40334 172 7.918699 13.62016228 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 44.3 0.00421   NR MCX8193758.1 2026773 g40006 i0 51.2 2.28488372093023 41 20 71.5 0 49 171 787 827 MCX8193758.1 HsdR family type I site-specific deoxyribonuclease [Candidatus Pacearchaeota archaeon] diamond 393 44.3 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;