RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA572587", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA572587 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5662704 5662704 PRJNA572587_P_NODE_3085_length_745_cov_7.475575_g2827_i0 PRJNA572587 3085 745 7.475575 55.69303375 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 306 1.68e-100   NR HQB83310.1 3022866 g2827 i0 81.1 0.853691275167785 212 40 85.4 0 734 99 138 349 HQB83310.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Candidatus Rifleibacterium sp.] diamond 636 306 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.
28847806 28847806 PRJNA572587_P_NODE_41288_length_170_cov_3.446281_g40960_i0 PRJNA572587 41288 170 3.446281 5.8586777 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 58.5 3.66e-8   NR HOI90487.1 3022866 g40960 i0 61 0.723529411764706 41 16 72.4 0 130 8 199 239 HOI90487.1 hypothetical protein [Candidatus Rifleibacterium sp.] diamond 123 58.5 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;