RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA565778" and tax_phylum = "Halobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Halobacteriota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA565778 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29132276 29132276 PRJNA565778_S_NODE_12069_length_315_cov_14.205036_g11773_i0 PRJNA565778 12069 315 14.205036 44.7458634 Halobacteriota archaeon 3100168 Archaea Archaea 63.5 1.46e-9   NR MDY6960110.1 3100168 g11773 i0 34.7 1.7047619047619 95 61 90.5 1 304 20 65 158 MDY6960110.1 hypothetical protein [Halobacteriota archaeon] diamond 537 63.5 1 Archaea   Methanobacteriati Halobacteriota         Halobacteriota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;