RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA565778", tax_phylum = "Cressdnaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Cressdnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA565778 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8211517 8211517 PRJNA565778_S_NODE_627_length_978_cov_6.223167_g569_i0 PRJNA565778 627 978 6.223167 60.86257326 Red panda feces-associated circular DNA virus 17 2863970 Viruses Viruses 231 1.1899999999999995e-55   NTclustered gi|2099633191|gb|MZ556186.1| 2863970 g569 i0 93.59 0.159509202453988 156 8 16 2 150 305 4448 4601 Red panda feces-associated circular DNA virus 17 isolate Rpf280cress07-12 genomic sequence blastn 156 231 1 Viruses   Shotokuvirae Cressdnaviricota         Red panda feces-associated circular DNA virus 17
13312068 13312068 PRJNA565778_S_NODE_13431_length_300_cov_4.403042_g13135_i0 PRJNA565778 13431 300 4.403042 13.209126 Red panda feces-associated circular DNA virus 23 2863977 Viruses Viruses 89.8 2.13e-13   NTclustered gi|2099633381|gb|MZ556221.1| 2863977 g13135 i0 83 0.333333333333333 100 15 33 2 58 156 2400 2498 Red panda feces-associated circular DNA virus 23 isolate Rpf113unssDNA01-8 genomic sequence blastn 100 89.8 1 Viruses   Shotokuvirae Cressdnaviricota         Red panda feces-associated circular DNA virus 23
24784750 24784750 PRJNA565778_S_NODE_960_length_851_cov_6.981572_g569_i1 PRJNA565778 960 851 6.981572 59.41317772 Red panda feces-associated circular DNA virus 17 2863970 Viruses Viruses 104 2.33e-17   NTclustered gi|2099633191|gb|MZ556186.1| 2863970 g569 i1 95.455 0.0775558166862515 66 2 8 1 114 178 4536 4601 Red panda feces-associated circular DNA virus 17 isolate Rpf280cress07-12 genomic sequence blastn 66 104 1 Viruses   Shotokuvirae Cressdnaviricota         Red panda feces-associated circular DNA virus 17

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;