RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA565778" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565778 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5662287 5662287 PRJNA565778_S_NODE_8325_length_373_cov_3.366071_g8031_i0 PRJNA565778 8325 373 3.366071 12.55544483 Anemonia sulcata 6108 Cnidaria other_Eukaryota 69.4 3.52e-7   NTclustered gi|2917940696|emb|OZ237557.1| 6108 g8031 i0 82.143 301.833780160858 84 11 21 2 229 308 2830730 2830813 Anemonia sulcata genome assembly, chromosome: 3 blastn 112584 69.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
6936466 6936466 PRJNA565778_S_NODE_34026_length_187_cov_3.140000_g33730_i0 PRJNA565778 34026 187 3.14 5.8718 Paramuricea clavata 317549 Cnidaria other_Eukaryota 73.6 2.2e-13   NR CAB4001185.1 317549 g33730 i0 76.7 1.57219251336898 43 10 69 0 130 2 3 45 CAB4001185.1 dnaJ homolog subfamily A member 2 [Paramuricea clavata] diamond 294 73.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
7513711 7513711 PRJNA565778_S_NODE_5046_length_461_cov_1699.603774_g4809_i0 PRJNA565778 5046 461 1699.603774 7835.17339814 Acropora 6127 Cnidaria other_Eukaryota 133 6.39e-33   NR KAK2558371.1 6130 g4809 i0 56 1.41865509761388 109 48 70.9 0 388 62 607 715 KAK2558371.1 Nuclear pore complex protein Nup107 [Acropora cervicornis] diamond 654 133 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora cervicornis
9486541 9486541 PRJNA565778_S_NODE_18628_length_256_cov_215.890411_g18332_i0 PRJNA565778 18628 256 215.890411 552.67945216 Anemonia sulcata 6108 Cnidaria other_Eukaryota 65.8 2.99e-6   NTclustered gi|2917940759|emb|OZ237572.1| 6108 g18332 i0 95.122 0.74609375 41 2 16 0 116 156 5752933 5752893 Anemonia sulcata genome assembly, chromosome: 18 blastn 191 65.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
17135782 17135782 PRJNA565778_S_NODE_14_length_2098_cov_3.901989_g12_i0 PRJNA565778 14 2098 3.901989 81.86372922 Metazoa 33208 Cnidaria other_Eukaryota 687 6.22e-236   NR XP_048587532.1 45351 g12 i0 54.2 9.30028598665396 659 279 93.4 5 2093 135 206 847 XP_048587532.1 pre-mRNA-splicing factor SYF1-like [Nematostella vectensis] diamond 19512 687 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
23510610 23510610 PRJNA565778_S_NODE_22239_length_235_cov_1.525253_g21943_i0 PRJNA565778 22239 235 1.525253 3.58434455 Trachyphyllia geoffroyi 196280 Cnidaria other_Eukaryota 429 8.33e-116   NTclustered gi|23503507|dbj|AB085641.1| 196280 g21943 i0 99.574 5 235 1 100 0 1 235 300 534 Trachyphyllia geoffroyi mRNA for Kaede, complete cds blastn 1175 429 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Trachyphyllia Trachyphyllia geoffroyi
24087674 24087674 PRJNA565778_S_NODE_19519_length_251_cov_2.345794_g19223_i0 PRJNA565778 19519 251 2.345794 5.88794294 Xenia sp. Carnegie-2 86540 Cnidaria other_Eukaryota 76.6 4.65e-14   NR XP_046855008.1 2897299 g19223 i0 50.7 0.824701195219124 69 33 81.3 1 238 35 286 354 XP_046855008.1 rho GTPase-activating protein 44-like isoform X2 [Xenia sp. Carnegie-2017] diamond 207 76.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
24087791 24087791 PRJNA565778_S_NODE_7419_length_392_cov_102.123944_g7134_i0 PRJNA565778 7419 392 102.123944 400.32586048 Montipora 46703 Cnidaria other_Eukaryota 52.8 0.037   NTclustered gi|2812154001|ref|XM_068889629.1| 246305 g7134 i0 100 0.571428571428571 28 0 7 0 23 50 1550 1523 PREDICTED: Montipora capricornis galanin receptor type 1-like (LOC138043384), mRNA blastn 224 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis
26858355 26858355 PRJNA565778_S_NODE_20461_length_244_cov_783.347826_g20165_i0 PRJNA565778 20461 244 783.347826 1911.36869544 Desmophyllum pertusum 174260 Cnidaria other_Eukaryota 75.5 4.3e-14   NR KAJ7389832.1 174260 g20165 i0 66.1 2.69262295081967 59 19 71.3 1 33 206 115 173 KAJ7389832.1 Transient receptor putative cation channel sub M member 2 [Desmophyllum pertusum] diamond 657 75.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Caryophylliidae Desmophyllum Desmophyllum pertusum
31009353 31009353 PRJNA565778_S_NODE_5074_length_460_cov_290.893617_g4837_i0 PRJNA565778 5074 460 290.893617 1338.1106382 Metazoa 33208 Cnidaria other_Eukaryota 127 1.81e-33   NR CAH3124719.1 104759 g4837 i0 51.7 5.98695652173913 116 56 75.7 0 443 96 80 195 CAH3124719.1 unnamed protein product [Porites lobata] diamond 2754 127 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites lobata
31483821 31483821 PRJNA565778_S_NODE_236_length_1247_cov_3.200000_g208_i0 PRJNA565778 236 1247 3.2 39.904 Scleractinia 6125 Cnidaria other_Eukaryota 106 1.63e-21   NR XP_020609478.1 48498 g208 i0 50.9 1.43865276663994 110 52 26.2 2 1089 763 59 167 XP_020609478.1 uncharacterized protein LOC110048052 isoform X1 [Orbicella faveolata] diamond 1794 107 0.990654205607477 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
32797392 32797392 PRJNA565778_S_NODE_22300_length_234_cov_115.441624_g22004_i0 PRJNA565778 22300 234 115.441624 270.13340016 Porites evermanni 104178 Cnidaria other_Eukaryota 66.6 1.16e-10   NR CAH3158448.1 104178 g22004 i0 45.5 4.94871794871795 66 36 84.6 0 32 229 264 329 CAH3158448.1 unnamed protein product [Porites evermanni] diamond 1158 66.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites evermanni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;