RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA565778" and tax_phylum = "Bacillariophyta"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA565778 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22235443 22235443 PRJNA565778_S_NODE_33898_length_187_cov_78.353333_g33602_i0 PRJNA565778 33898 187 78.353333 146.52073271 Nitzschia dissipata 303402 SAR_Eukaryotes SAR_Eukaryotes 139 1.19e-28   NTclustered gi|2248495830|ref|NC_063456.1| 303402 g33602 i0 90.476 32.8983957219251 105 10 56 0 1 105 36373 36477 Nitzschia dissipata isolate Qingdao in China mitochondrion, complete genome blastn 6152 139 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia dissipata
30205595 30205595 PRJNA565778_S_NODE_28492_length_206_cov_8.591716_g28196_i0 PRJNA565778 28492 206 8.591716 17.69893496 Mayamaea pseudoterrestris 2872254 SAR_Eukaryotes SAR_Eukaryotes 51.6 1.63e-5   NR GKY91383.1 2872254 g28196 i0 65.8 0.553398058252427 38 13 55.3 0 204 91 298 335 GKY91383.1 hypothetical protein MPSEU_000110600 [Mayamaea pseudoterrestris] diamond 114 51.6 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Mayamaea Mayamaea pseudoterrestris

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;