contig_metadata
10 rows where bioproject = "PRJNA565778", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1135775 | 1135775 | PRJNA565778_S_NODE_21481_length_239_cov_3.455446_g21185_i0 | PRJNA565778 | 21481 | 239 | 3.455446 | 8.25851594 | Vicinamibacteraceae bacterium | 2590576 | Bacteria | Bacteria | 96.3 | 8.76e-23 | NR | MEO5824180.1 | 2590576 | g21185 | i0 | 80.7 | 0.715481171548117 | 57 | 11 | 71.5 | 0 | 35 | 205 | 113 | 169 | MEO5824180.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Vicinamibacteraceae bacterium] | diamond | 171 | 96.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Vicinamibacteraceae bacterium | |||
| 8211467 | 8211467 | PRJNA565778_S_NODE_42207_length_154_cov_1.521368_g41911_i0 | PRJNA565778 | 42207 | 154 | 1.521368 | 2.34290672 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 191 | 2.57e-44 | NTclustered | gi|2874253710|emb|OY969475.1| | 2283092 | g41911 | i0 | 94.355 | 163.948051948052 | 124 | 7 | 81 | 0 | 25 | 148 | 1822665 | 1822542 | MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 | blastn | 25248 | 191 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 12614708 | 12614708 | PRJNA565778_S_NODE_1010_length_839_cov_46.901496_g936_i0 | PRJNA565778 | 1010 | 839 | 46.901496 | 393.50355144 | Acidobacteriota | 57723 | Bacteria | Bacteria | 334 | 3.419999999999999e-105 | NR | MCS6807119.1 | 2052146 | g936 | i0 | 62.1 | 2.88557806912992 | 269 | 99 | 95.5 | 2 | 38 | 838 | 34 | 301 | MCS6807119.1 SufD family Fe-S cluster assembly protein [Blastocatellia bacterium] | diamond | 2421 | 336 | 0.994047619047619 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellia bacterium | |||||
| 15860711 | 15860711 | PRJNA565778_S_NODE_12213_length_313_cov_118.742754_g11917_i0 | PRJNA565778 | 12213 | 313 | 118.742754 | 371.66482002 | Bacteria | 2 | Bacteria | Bacteria | 153 | 9.279999999999998e-42 | NR | MBW8825661.1 | 1978231 | g11917 | i0 | 82.6 | 23.8562300319489 | 92 | 16 | 88.2 | 0 | 308 | 33 | 300 | 391 | MBW8825661.1 NADH-quinone oxidoreductase subunit M [Acidobacteriota bacterium] | diamond | 7467 | 153 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 15861202 | 15861202 | PRJNA565778_S_NODE_9873_length_345_cov_101.883117_g9577_i0 | PRJNA565778 | 9873 | 345 | 101.883117 | 351.49675365 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 366 | 1.0299999999999996e-96 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g9577 | i0 | 89.347 | 133.240579710145 | 291 | 31 | 84 | 0 | 38 | 328 | 3298163 | 3298453 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 45968 | 366 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 26762942 | 26762942 | PRJNA565778_S_NODE_1441_length_743_cov_7.101983_g1339_i0 | PRJNA565778 | 1441 | 743 | 7.101983 | 52.76773369 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 119 | 3.86e-29 | NR | HEX8847750.1 | 2283092 | g1339 | i0 | 43.4 | 1.01345895020188 | 122 | 69 | 49.3 | 0 | 684 | 319 | 83 | 204 | HEX8847750.1 hypothetical protein [Pyrinomonadaceae bacterium] | diamond | 753 | 119 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 27016127 | 27016127 | PRJNA565778_S_NODE_28922_length_204_cov_149.586826_g28626_i0 | PRJNA565778 | 28922 | 204 | 149.586826 | 305.15712504 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 80.9 | 3.83e-16 | NR | MBA4121894.1 | 1978231 | g28626 | i0 | 86 | 1.98529411764706 | 43 | 6 | 63.2 | 0 | 160 | 32 | 218 | 260 | MBA4121894.1 ABC transporter ATP-binding protein [Acidobacteriota bacterium] | diamond | 405 | 80.9 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 27553201 | 27553201 | PRJNA565778_S_NODE_5724_length_437_cov_68.817500_g5468_i0 | PRJNA565778 | 5724 | 437 | 68.8175 | 300.732475 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 117 | 8.53e-29 | NR | HEV3059680.1 | 2910147 | g5468 | i0 | 53.3 | 1.51716247139588 | 120 | 53 | 82.4 | 1 | 40 | 399 | 3 | 119 | HEV3059680.1 FAD-dependent thymidylate synthase [Vicinamibacterales bacterium] | diamond | 663 | 117 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 28640733 | 28640733 | PRJNA565778_S_NODE_11287_length_325_cov_6.767361_g10991_i0 | PRJNA565778 | 11287 | 325 | 6.767361 | 21.99392325 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 53.9 | 6.27e-6 | NR | WP_243295907.1 | 2922723 | g10991 | i0 | 35.3 | 2.16 | 68 | 44 | 62.8 | 0 | 258 | 55 | 10 | 77 | WP_243295907.1 hypothetical protein [Geothrix mesophila] | diamond | 702 | 54.3 | 0.992633517495396 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix mesophila | ||
| 32070994 | 32070994 | PRJNA565778_S_NODE_32038_length_193_cov_95.371795_g31742_i0 | PRJNA565778 | 32038 | 193 | 95.371795 | 184.06756435 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 47.8 | 3.35e-4 | NR | HEY8562411.1 | 2283092 | g31742 | i0 | 66.7 | 1.11917098445596 | 36 | 12 | 56 | 0 | 145 | 38 | 1 | 36 | HEY8562411.1 glycoside hydrolase family 2 protein [Pyrinomonadaceae bacterium] | diamond | 216 | 47.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;