contig_metadata
9 rows where bioproject = "PRJNA565778", tax_kingdom = "Pseudomonadati" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5662047 | 5662047 | PRJNA565778_S_NODE_27845_length_209_cov_3.965116_g27549_i0 | PRJNA565778 | 27845 | 209 | 3.965116 | 8.28709244 | Brachyspira murdochii | 84378 | Bacteria | Bacteria | 62.1 | 3.04e-5 | NTclustered | gi|296016874|gb|CP001959.1| | 526224 | g27549 | i0 | 91.111 | 0.416267942583732 | 45 | 4 | 22 | 0 | 74 | 118 | 3163465 | 3163421 | Brachyspira murdochii DSM 12563, complete genome | blastn | 87 | 62.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira murdochii | ||
| 27016134 | 27016134 | PRJNA565778_S_NODE_9502_length_352_cov_5.053968_g9206_i0 | PRJNA565778 | 9502 | 352 | 5.053968 | 17.78996736 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 118 | 1.4199999999999998e-31 | NR | TXG86438.1 | 2202144 | g9206 | i0 | 98.2 | 0.46875 | 55 | 1 | 46.9 | 0 | 352 | 188 | 68 | 122 | TXG86438.1 MAG: hypothetical protein E6R13_00450 [Spirochaetota bacterium] | diamond | 165 | 118 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 27441062 | 27441062 | PRJNA565778_S_NODE_14123_length_293_cov_1.828125_g13827_i0 | PRJNA565778 | 14123 | 293 | 1.828125 | 5.35640625 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 42.4 | 0.0402 | NR | WP_014803165.1 | 29510 | g13827 | i0 | 60 | 0.747440273037543 | 35 | 14 | 35.8 | 0 | 15 | 119 | 107 | 141 | WP_014803165.1 GatB/YqeY domain-containing protein [Turneriella parva] | diamond | 219 | 42.7 | 0.992974238875878 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Turneriella | Turneriella parva | ||
| 29289952 | 29289952 | PRJNA565778_S_NODE_37549_length_176_cov_9.661871_g37253_i0 | PRJNA565778 | 37549 | 176 | 9.661871 | 17.00489296 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 89 | 2.6e-21 | NR | TXG86437.1 | 2202144 | g37253 | i0 | 89.1 | 0.784090909090909 | 46 | 5 | 78.4 | 0 | 139 | 2 | 54 | 99 | TXG86437.1 MAG: hypothetical protein E6R13_00445 [Spirochaetota bacterium] | diamond | 138 | 89 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 29858261 | 29858261 | PRJNA565778_S_NODE_10031_length_343_cov_3.777778_g9735_i0 | PRJNA565778 | 10031 | 343 | 3.777778 | 12.95777854 | Leptospira sp. | 178 | Bacteria | Bacteria | 184 | 4.559999999999999e-52 | NR | NCN09903.1 | 178 | g9735 | i0 | 90.1 | 0.883381924198251 | 101 | 7 | 88.3 | 1 | 35 | 337 | 576 | 673 | NCN09903.1 hypothetical protein [Leptospira sp.] | diamond | 303 | 184 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. | ||
| 31027533 | 31027533 | PRJNA565778_S_NODE_28115_length_208_cov_2.672515_g27819_i0 | PRJNA565778 | 28115 | 208 | 2.672515 | 5.5588312 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 114 | 1.2200000000000002e-27 | NR | TXG85034.1 | 2202144 | g27819 | i0 | 91.4 | 0.836538461538462 | 58 | 5 | 83.7 | 0 | 206 | 33 | 119 | 176 | TXG85034.1 MAG: hypothetical protein E6R13_02405 [Spirochaetota bacterium] | diamond | 174 | 114 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 31533453 | 31533453 | PRJNA565778_S_NODE_23896_length_226_cov_4.153439_g23600_i0 | PRJNA565778 | 23896 | 226 | 4.153439 | 9.38677214 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 131 | 2.13e-33 | NR | TXG81818.1 | 2202144 | g23600 | i0 | 96.9 | 0.849557522123894 | 64 | 2 | 85 | 0 | 33 | 224 | 565 | 628 | TXG81818.1 MAG: hypothetical protein E6R13_05795 [Spirochaetota bacterium] | diamond | 192 | 131 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 31786072 | 31786072 | PRJNA565778_S_NODE_6997_length_402_cov_146.586301_g6719_i0 | PRJNA565778 | 6997 | 402 | 146.586301 | 589.27693002 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 122 | 8.03e-31 | NR | TXG86121.1 | 2202144 | g6719 | i0 | 53.5 | 0.850746268656716 | 114 | 53 | 85.1 | 0 | 344 | 3 | 92 | 205 | TXG86121.1 MAG: hypothetical protein E6R13_01155 [Spirochaetota bacterium] | diamond | 342 | 122 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 32387407 | 32387407 | PRJNA565778_S_NODE_6859_length_406_cov_5.487805_g6582_i0 | PRJNA565778 | 6859 | 406 | 5.487805 | 22.2804883 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 219 | 6.57e-71 | NR | TXG85442.1 | 2202144 | g6582 | i0 | 97.2 | 0.798029556650246 | 108 | 3 | 79.8 | 0 | 51 | 374 | 1 | 108 | TXG85442.1 MAG: hypothetical protein E6R13_02105 [Spirochaetota bacterium] | diamond | 324 | 219 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;