RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA565778", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA565778 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26776785 26776785 PRJNA565778_S_NODE_30221_length_200_cov_2.006135_g29925_i0 PRJNA565778 30221 200 2.006135 4.01227 Eurotatoria 2816136 Rotifera other_Eukaryota 71.6 5.53e-13   NR UJR09465.1 104782 g29925 i0 42.6 2.745 61 35 91.5 0 16 198 34 94 UJR09465.1 hypothetical protein I4U23_013703 [Adineta vaga] diamond 549 71.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
29668515 29668515 PRJNA565778_S_NODE_33050_length_190_cov_3.013072_g32754_i0 PRJNA565778 33050 190 3.013072 5.7248368 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 72.4 6.51e-13   NR CAF1135517.1 392030 g32754 i0 91.9 5.2578947368421 37 3 58.4 0 175 65 368 404 CAF1135517.1 unnamed protein product [Rotaria magnacalcarata] diamond 999 72.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
29953129 29953129 PRJNA565778_S_NODE_38751_length_172_cov_2.022222_g38455_i0 PRJNA565778 38751 172 2.022222 3.47822184 Rotaria socialis 392032 Rotifera other_Eukaryota 73.6 1.43e-13   NR CAF3629932.1 392032 g38455 i0 54.4 3.97674418604651 57 26 99.4 0 172 2 129 185 CAF3629932.1 unnamed protein product [Rotaria socialis] diamond 684 73.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;