contig_metadata
18 rows where bioproject = "PRJNA565778" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1833779 | 1833779 | PRJNA565778_S_NODE_33322_length_189_cov_5.421053_g33026_i0 | PRJNA565778 | 33322 | 189 | 5.421053 | 10.24579017 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 67.6 | 5.79e-7 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g33026 | i0 | 97.436 | 0.206349206349206 | 39 | 1 | 21 | 0 | 118 | 156 | 3833289 | 3833327 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 39 | 67.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 1833979 | 1833979 | PRJNA565778_S_NODE_9882_length_345_cov_44.100649_g9586_i0 | PRJNA565778 | 9882 | 345 | 44.100649 | 152.14723905 | Parachlamydia acanthamoebae | 83552 | Bacteria | Bacteria | 573 | 5.629999999999999e-159 | NTclustered | gi|336478352|emb|FR872580.1| | 765952 | g9586 | i0 | 100 | 0.898550724637681 | 310 | 0 | 90 | 0 | 36 | 345 | 1597045 | 1596736 | Parachlamydia acanthamoebae UV-7, complete genome | blastn | 310 | 573 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 4385605 | 4385605 | PRJNA565778_S_NODE_15564_length_280_cov_4.777778_g15268_i0 | PRJNA565778 | 15564 | 280 | 4.777778 | 13.3777784 | Isosphaeraceae bacterium EP7 | 3139350 | Bacteria | Bacteria | 195 | 4.05e-45 | NTclustered | gi|2719878338|gb|CP151667.1| | 3139350 | g15268 | i0 | 95.122 | 40.2142857142857 | 123 | 6 | 44 | 0 | 33 | 155 | 4040193 | 4040315 | Isosphaeraceae bacterium EP7 chromosome, complete genome | blastn | 11260 | 195 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium EP7 | ||
| 6239403 | 6239403 | PRJNA565778_S_NODE_4045_length_506_cov_7.268657_g3831_i0 | PRJNA565778 | 4045 | 506 | 7.268657 | 36.77940442 | Luteolibacter | 518753 | Bacteria | Bacteria | 455 | 3.2300000000000004e-123 | NTclustered | gi|2029343589|gb|CP073100.1| | 2824561 | g3831 | i0 | 84.829 | 155.065217391304 | 468 | 54 | 91 | 14 | 26 | 486 | 276278 | 276735 | Luteolibacter ambystomatis strain 32A chromosome, complete genome | blastn | 78463 | 457 | 0.99562363238512 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter ambystomatis | |
| 9486574 | 9486574 | PRJNA565778_S_NODE_21128_length_240_cov_636.866995_g20832_i0 | PRJNA565778 | 21128 | 240 | 636.866995 | 1528.480788 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 193 | 1.22e-44 | NTclustered | gi|2874253964|emb|OY970289.1| | 2715253 | g20832 | i0 | 83.981 | 6.55416666666667 | 206 | 28 | 85 | 4 | 2 | 204 | 313048 | 312845 | MAG: Pirellulales bacterium isolate MFD05442.bin.c.2 genome assembly, chromosome: 1 | blastn | 1573 | 193 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium | |||
| 14586938 | 14586938 | PRJNA565778_S_NODE_16192_length_274_cov_388.755274_g15896_i0 | PRJNA565778 | 16192 | 274 | 388.755274 | 1065.18945076 | Frigoriglobus tundricola | 2774151 | Bacteria | Bacteria | 285 | 2.28e-72 | NTclustered | gi|1870286614|gb|CP053452.2| | 2774151 | g15896 | i0 | 90.654 | 324.667883211679 | 214 | 20 | 78 | 0 | 22 | 235 | 4958815 | 4958602 | Frigoriglobus tundricola strain PL17 chromosome, complete genome | blastn | 88959 | 285 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Frigoriglobus | Frigoriglobus tundricola | |
| 19684965 | 19684965 | PRJNA565778_S_NODE_6796_length_408_cov_2.908356_g6522_i0 | PRJNA565778 | 6796 | 408 | 2.908356 | 11.86609248 | Parachlamydia acanthamoebae | 83552 | Bacteria | Bacteria | 702 | 0 | NTclustered | gi|336478352|emb|FR872580.1| | 765952 | g6522 | i0 | 100 | 0.931372549019608 | 380 | 0 | 93 | 0 | 1 | 380 | 1910955 | 1910576 | Parachlamydia acanthamoebae UV-7, complete genome | blastn | 380 | 702 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 23510527 | 23510527 | PRJNA565778_S_NODE_16299_length_274_cov_2.303797_g16003_i0 | PRJNA565778 | 16299 | 274 | 2.303797 | 6.31240378 | Parachlamydia acanthamoebae | 83552 | Bacteria | Bacteria | 496 | 9.67e-136 | NTclustered | gi|336478352|emb|FR872580.1| | 765952 | g16003 | i0 | 99.27 | 1 | 274 | 2 | 100 | 0 | 1 | 274 | 2776375 | 2776102 | Parachlamydia acanthamoebae UV-7, complete genome | blastn | 274 | 496 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 23510917 | 23510917 | PRJNA565778_S_NODE_9039_length_359_cov_178.478261_g8743_i0 | PRJNA565778 | 9039 | 359 | 178.478261 | 640.73695699 | Parachlamydia acanthamoebae | 83552 | Bacteria | Bacteria | 582 | 9.75e-162 | NTclustered | gi|336478352|emb|FR872580.1| | 765952 | g8743 | i0 | 99.074 | 0.902506963788301 | 324 | 3 | 90 | 0 | 36 | 359 | 2775805 | 2776128 | Parachlamydia acanthamoebae UV-7, complete genome | blastn | 324 | 582 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 27584980 | 27584980 | PRJNA565778_S_NODE_25824_length_217_cov_37.061111_g25528_i0 | PRJNA565778 | 25824 | 217 | 37.061111 | 80.42261087 | Parachlamydia sp. | 2052048 | Bacteria | Bacteria | 55.5 | 8.76e-7 | NR | MCE5318139.1 | 2052048 | g25528 | i0 | 48.4 | 0.857142857142857 | 62 | 32 | 85.7 | 0 | 31 | 216 | 417 | 478 | MCE5318139.1 ATP-binding protein [Parachlamydia sp.] | diamond | 186 | 55.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia sp. | |
| 28703822 | 28703822 | PRJNA565778_S_NODE_26267_length_215_cov_151.303371_g25971_i0 | PRJNA565778 | 26267 | 215 | 151.303371 | 325.30224765 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 43.9 | 0.00434 | NR | MSU62638.1 | 2024890 | g25971 | i0 | 39.7 | 1.54883720930233 | 58 | 34 | 80.9 | 1 | 176 | 3 | 73 | 129 | MSU62638.1 hypothetical protein [Pedosphaera sp.] | diamond | 333 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera sp. | |
| 28879443 | 28879443 | PRJNA565778_S_NODE_27628_length_210_cov_2.676301_g27332_i0 | PRJNA565778 | 27628 | 210 | 2.676301 | 5.6202321 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 75.9 | 5.25e-14 | NR | HRJ77648.1 | 2026780 | g27332 | i0 | 90.2 | 0.585714285714286 | 41 | 4 | 58.6 | 0 | 198 | 76 | 774 | 814 | HRJ77648.1 protein DpdF [Planctomycetota bacterium] | diamond | 123 | 75.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29826671 | 29826671 | PRJNA565778_S_NODE_19691_length_249_cov_933.174528_g19395_i0 | PRJNA565778 | 19691 | 249 | 933.174528 | 2323.60457472 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 87 | 3.68e-20 | NR | MCE5293497.1 | 2047757 | g19395 | i0 | 52.1 | 0.879518072289157 | 73 | 32 | 84.3 | 1 | 211 | 2 | 21 | 93 | MCE5293497.1 hypothetical protein [Chlamydiales bacterium] | diamond | 219 | 87 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 29858278 | 29858278 | PRJNA565778_S_NODE_8591_length_368_cov_3.042296_g8295_i0 | PRJNA565778 | 8591 | 368 | 3.042296 | 11.19564928 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 47.8 | 0.00213 | NR | MBY0309332.1 | 2052180 | g8295 | i0 | 56.4 | 0.448369565217391 | 55 | 18 | 44 | 2 | 29 | 190 | 22 | 71 | MBY0309332.1 ankyrin repeat domain-containing protein [Phycisphaerales bacterium] | diamond | 165 | 47.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 30616510 | 30616510 | PRJNA565778_S_NODE_13253_length_302_cov_4.328302_g12957_i0 | PRJNA565778 | 13253 | 302 | 4.328302 | 13.07147204 | Candidatus Auribacterota bacterium | 2093365 | Bacteria | Bacteria | 73.2 | 8.7e-13 | NR | MBN1521042.1 | 2093365 | g12957 | i0 | 64.3 | 0.556291390728477 | 56 | 19 | 55.6 | 1 | 170 | 3 | 1 | 55 | MBN1521042.1 glycosyltransferase [Candidatus Auribacterota bacterium] | diamond | 168 | 73.2 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Auribacterota | Candidatus Auribacterota bacterium | |||||
| 31090537 | 31090537 | PRJNA565778_S_NODE_1035_length_835_cov_3.659148_g958_i0 | PRJNA565778 | 1035 | 835 | 3.659148 | 30.5538858 | Lentisphaeraceae bacterium | 2461380 | Bacteria | Bacteria | 56.2 | 7.46e-5 | NR | MCM8537330.1 | 2461380 | g958 | i0 | 32.2 | 1.27904191616766 | 121 | 76 | 42.4 | 3 | 357 | 4 | 3 | 120 | MCM8537330.1 oligopeptidase A [Lentisphaeraceae bacterium] | diamond | 1068 | 56.2 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaerales | Lentisphaeraceae | Lentisphaeraceae bacterium | ||
| 31862950 | 31862950 | PRJNA565778_S_NODE_37357_length_177_cov_2.507143_g37061_i0 | PRJNA565778 | 37357 | 177 | 2.507143 | 4.43764311 | Bacteria | 2 | Bacteria | Bacteria | 85.1 | 3.51e-19 | NR | MCI0458091.1 | 2052164 | g37061 | i0 | 69.2 | 4.72881355932203 | 52 | 16 | 88.1 | 0 | 1 | 156 | 83 | 134 | MCI0458091.1 class I SAM-dependent methyltransferase [Gemmataceae bacterium] | diamond | 837 | 85.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 32387397 | 32387397 | PRJNA565778_S_NODE_12719_length_308_cov_6.191882_g12423_i0 | PRJNA565778 | 12719 | 308 | 6.191882 | 19.07099656 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 108 | 3.45e-28 | NR | MCE5293497.1 | 2047757 | g12423 | i0 | 51.6 | 0.886363636363636 | 91 | 41 | 85.7 | 1 | 265 | 2 | 3 | 93 | MCE5293497.1 hypothetical protein [Chlamydiales bacterium] | diamond | 273 | 108 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;