RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA565778", tax_clade = "Candidatus Pacearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_kingdom 1

tax_clade 1

  • Candidatus Pacearchaeota · 2 ✖

bioproject 1

  • PRJNA565778 · 2 ✖

analysis 1

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27806208 27806208 PRJNA565778_S_NODE_25344_length_219_cov_71.719780_g25048_i0 PRJNA565778 25344 219 71.71978 157.0663182 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 54.7 1.26e-6   NR MBM3233565.1 2026773 g25048 i0 60.5 0.945205479452055 38 15 52.1 0 105 218 164 201 MBM3233565.1 nucleotidyltransferase domain-containing protein [Candidatus Pacearchaeota archaeon] diamond 207 54.7 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
28532402 28532402 PRJNA565778_S_NODE_21707_length_237_cov_903.915000_g21411_i0 PRJNA565778 21707 237 903.915 2142.27855 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 75.9 7.53e-14   NR MEM3113508.1 2026773 g21411 i0 71.2 1.86075949367089 52 15 65.8 0 156 1 96 147 MEM3113508.1 helicase C-terminal domain-containing protein [Candidatus Pacearchaeota archaeon] diamond 441 75.9 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;