RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA565778", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA565778 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28279420 28279420 PRJNA565778_S_NODE_10826_length_331_cov_43.272109_g10530_i0 PRJNA565778 10826 331 43.272109 143.23068079 Minisyncoccota bacterium 2053589 Bacteria Bacteria 103 1.25e-25   NR MEX0690151.1 2053589 g10530 i0 59.2 1.37764350453172 76 31 68.9 0 228 1 40 115 MEX0690151.1 5-formyltetrahydrofolate cyclo-ligase [Candidatus Paceibacterota bacterium] diamond 456 103 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31501797 31501797 PRJNA565778_S_NODE_5816_length_434_cov_97.123426_g5560_i0 PRJNA565778 5816 434 97.123426 421.51566884 Minisyncoccota bacterium 2053589 Bacteria Bacteria 45.8 0.00812   NR MDD2909782.1 2053589 g5560 i0 43.7 0.490783410138249 71 33 49.1 1 395 183 87 150 MDD2909782.1 Hsp70 family protein [Candidatus Paceibacterota bacterium] diamond 213 45.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;