RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA565778", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA565778 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29953122 29953122 PRJNA565778_S_NODE_21871_length_237_cov_2.410000_g21575_i0 PRJNA565778 21871 237 2.41 5.7117000000000004 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 40 0.0416   NR HEX5815179.1 2072417 g21575 i0 41.9 0.544303797468354 43 25 54.4 0 150 22 13 55 HEX5815179.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 129 40 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31659587 31659587 PRJNA565778_S_NODE_23337_length_229_cov_2.760417_g23041_i0 PRJNA565778 23337 229 2.760417 6.32135493 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 63.5 1.41e-9   NR MBI2116345.1 2072417 g23041 i0 37.1 1.67685589519651 70 44 91.7 0 219 10 290 359 MBI2116345.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 384 63.5 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32734821 32734821 PRJNA565778_S_NODE_14860_length_286_cov_4.911647_g14564_i0 PRJNA565778 14860 286 4.911647 14.04731042 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 164 2.0399999999999998e-47   NR HXG19573.1 2072417 g14564 i0 82.8 1.95104895104895 93 16 97.6 0 1 279 232 324 HXG19573.1 LLM class flavin-dependent oxidoreductase [Candidatus Methylomirabilota bacterium] diamond 558 164 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;