RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA565778", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Falkowiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Falkowiibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA565778 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27504097 27504097 PRJNA565778_S_NODE_31623_length_195_cov_2.468354_g31327_i0 PRJNA565778 31623 195 2.468354 4.8132903 Bacteria 2 Bacteria Bacteria 53.5 2.99e-7   NR KKR33554.1 1618642 g31327 i0 47.1 7.23076923076923 51 27 78.5 0 32 184 35 85 KKR33554.1 MAG: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [Candidatus Falkowbacteria bacterium GW2011_GWF2_39_8] diamond 1410 53.5 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium GW2011_GWF2_39_8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;