RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA565584" and tax_phylum = "Entoprocta"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Entoprocta · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565584 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7513282 7513282 PRJNA565584_P_NODE_74686_length_344_cov_1.095941_g73535_i0 PRJNA565584 74686 344 1.095941 3.77003704 Barentsia elongata 478378 Entoprocta other_Eukaryota 190 1.83e-58   NR ABW93480.1 478378 g73535 i0 77.2 0.994186046511628 114 26 99.4 0 342 1 44 157 ABW93480.1 putative ribosomal protein SA, partial [Barentsia elongata] diamond 342 190 1 Eukaryota Opisthokonta Metazoa Entoprocta     Barentsiidae Barentsia Barentsia elongata
28703811 28703811 PRJNA565584_P_NODE_52427_length_410_cov_5.412463_g51276_i0 PRJNA565584 52427 410 5.412463 22.1910983 Opisthokonta 33154 Entoprocta other_Eukaryota 94.7 3.85e-22   NR ABW90411.1 478378 g51276 i0 67.2 5.45853658536585 119 33 87.1 2 378 22 1 113 ABW90411.1 putative ribosomal protein P2 [Barentsia elongata] diamond 2238 95.5 0.991623036649215 Eukaryota Opisthokonta Metazoa Entoprocta     Barentsiidae Barentsia Barentsia elongata
31849329 31849329 PRJNA565584_P_NODE_140217_length_268_cov_4.133333_g139065_i0 PRJNA565584 140217 268 4.133333 11.07733244 Barentsia elongata 478378 Entoprocta other_Eukaryota 152 1.85e-45   NR ABW90423.1 478378 g139065 i0 83.7 17.3171641791045 86 14 96.3 0 9 266 1 86 ABW90423.1 putative ribosomal protein S17 [Barentsia elongata] diamond 4641 152 1 Eukaryota Opisthokonta Metazoa Entoprocta     Barentsiidae Barentsia Barentsia elongata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;