RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where bioproject = "PRJNA565584" and tax_phylum = "Ctenophora"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ctenophora · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565584 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2410482 2410482 PRJNA565584_P_NODE_47122_length_434_cov_2.121884_g45971_i0 PRJNA565584 47122 434 2.121884 9.20897656 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 121 1.08e-28   NR XP_063674629.1 2820187 g45971 i0 57.3 0.988479262672811 143 61 98.8 0 5 433 639 781 XP_063674629.1 LOW QUALITY PROTEIN: major vault protein-like [Bolinopsis microptera] diamond 429 121 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
17132414 17132414 PRJNA565584_P_NODE_125574_length_278_cov_1.634146_g124422_i0 PRJNA565584 125574 278 1.634146 4.54292588 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 178 4.05e-40   NTclustered gi|2700955194|ref|XM_063817774.1| 2820187 g124422 i0 78.339 65.1546762589928 277 58 99 2 2 277 470 745 PREDICTED: Bolinopsis microptera tubulin alpha-1A chain-like (LOC134811063), mRNA blastn 18113 178 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
27142323 27142323 PRJNA565584_P_NODE_87622_length_317_cov_2.430328_g86470_i0 PRJNA565584 87622 317 2.430328 7.70413976 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 59.3 1.28e-7   NR XP_063695447.1 2820187 g86470 i0 43.1 1.2397476340694 65 36 60.6 1 219 28 269 333 XP_063695447.1 digestive cysteine proteinase 2-like [Bolinopsis microptera] diamond 393 59.3 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
27427216 27427216 PRJNA565584_P_NODE_17383_length_772_cov_9.995708_g16305_i0 PRJNA565584 17383 772 9.995708 77.16686576 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 268 2.9399999999999985e-87   NR XP_063687402.1 2820187 g16305 i0 68.6 0.753886010362694 194 60 75.4 1 62 643 1 193 XP_063687402.1 peroxiredoxin-like [Bolinopsis microptera] diamond 582 268 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
27490312 27490312 PRJNA565584_P_NODE_58463_length_389_cov_0.958861_g57312_i0 PRJNA565584 58463 389 0.958861 3.72996929 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 79 3.3e-14   NR XP_063679678.1 2820187 g57312 i0 49.2 7.51156812339332 63 32 48.6 0 198 386 267 329 XP_063679678.1 7SK snRNA methylphosphate capping enzyme-like [Bolinopsis microptera] diamond 2922 79 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
27837405 27837405 PRJNA565584_P_NODE_56224_length_396_cov_2.777090_g55073_i0 PRJNA565584 56224 396 2.77709 10.9972764 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 129 2.27e-32   NR XP_063675463.1 2820187 g55073 i0 70.2 0.636363636363636 84 25 63.6 0 253 2 9 92 XP_063675463.1 peptidyl-prolyl cis-trans isomerase FKBP4-like [Bolinopsis microptera] diamond 252 129 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
28153494 28153494 PRJNA565584_P_NODE_67465_length_362_cov_0.948097_g66314_i0 PRJNA565584 67465 362 0.948097 3.43211114 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 120 2.13e-30   NR XP_063681920.1 2820187 g66314 i0 49.2 0.977900552486188 118 58 97.8 1 361 8 63 178 XP_063681920.1 uncharacterized protein LOC134816850 [Bolinopsis microptera] diamond 354 120 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
29321475 29321475 PRJNA565584_P_NODE_81309_length_330_cov_0.992218_g80157_i0 PRJNA565584 81309 330 0.992218 3.2743194 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 48.5 9.58e-4   NR XP_063693375.1 2820187 g80157 i0 31.8 0.772727272727273 85 56 77.3 1 2 256 165 247 XP_063693375.1 insulin-degrading enzyme-like [Bolinopsis microptera] diamond 255 48.5 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
29636826 29636826 PRJNA565584_P_NODE_187470_length_247_cov_0.885057_g186318_i0 PRJNA565584 187470 247 0.885057 2.18609079 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 55.1 5.97e-7   NR XP_063677063.1 2820187 g186318 i0 44.3 0.850202429149798 70 38 85 1 36 245 94 162 XP_063677063.1 calmodulin-A-like [Bolinopsis microptera] diamond 210 55.1 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
29763402 29763402 PRJNA565584_P_NODE_66491_length_364_cov_2.113402_g65340_i0 PRJNA565584 66491 364 2.113402 7.69278328 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 60.1 8.94e-8   NR XP_063676167.1 2820187 g65340 i0 41.8 1.60714285714286 98 42 80.8 1 2 295 204 286 XP_063676167.1 large ribosomal subunit protein uL18-like [Bolinopsis microptera] diamond 585 60.1 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
29889931 29889931 PRJNA565584_P_NODE_101731_length_296_cov_1.636771_g100579_i0 PRJNA565584 101731 296 1.636771 4.84484216 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 144 2.9e-41   NR XP_063680454.1 2820187 g100579 i0 67.3 10.9256756756757 98 32 99.3 0 295 2 31 128 XP_063680454.1 large ribosomal subunit protein uL13-like [Bolinopsis microptera] diamond 3234 144 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
29984708 29984708 PRJNA565584_P_NODE_61031_length_380_cov_2.006515_g59880_i0 PRJNA565584 61031 380 2.006515 7.624757 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 59.3 6.08e-8   NR XP_063683552.1 2820187 g59880 i0 51.1 0.718421052631579 45 22 35.5 0 200 66 110 154 XP_063683552.1 cell death-inducing p53-target protein 1 homolog [Bolinopsis microptera] diamond 273 59.3 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
30774597 30774597 PRJNA565584_P_NODE_127354_length_277_cov_1.509804_g126202_i0 PRJNA565584 127354 277 1.509804 4.18215708 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 95.1 2.17e-20   NR XP_063678953.1 2820187 g126202 i0 64.1 0.844765342960289 78 21 76.9 1 214 2 41 118 XP_063678953.1 dynamin-1-like protein [Bolinopsis microptera] diamond 234 95.1 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
32007723 32007723 PRJNA565584_P_NODE_57818_length_391_cov_1.081761_g56667_i0 PRJNA565584 57818 391 1.081761 4.22968551 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 53.5 2.28e-5   NR XP_063676941.1 2820187 g56667 i0 47.7 0.966751918158568 88 38 63.7 2 390 142 140 224 XP_063676941.1 uncharacterized protein LOC134813184 [Bolinopsis microptera] diamond 378 53.5 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
32166040 32166040 PRJNA565584_P_NODE_24118_length_636_cov_1.637655_g22985_i0 PRJNA565584 24118 636 1.637655 10.4154858 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 99.8 1.06e-22   NR XP_063690143.1 2820187 g22985 i0 38.3 3.71698113207547 128 73 58 4 541 173 19 145 XP_063690143.1 selenoprotein F-like isoform X2 [Bolinopsis microptera] diamond 2364 99.8 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;