RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA565584" and tax_phylum = "Candidatus Raymondiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Raymondiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA565584 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31438188 31438188 PRJNA565584_P_NODE_50716_length_417_cov_13.441860_g49565_i0 PRJNA565584 50716 417 13.44186 56.0525562 Candidatus Raymondbacteria bacterium RifOxyA12_full_5 1817884 Bacteria Bacteria 44.7 0.0494   NR OGJ89351.1 1817884 g49565 i0 35.1 0.410071942446043 57 37 41 0 149 319 499 555 OGJ89351.1 MAG: hypothetical protein A2268_08485 [Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37] diamond 171 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Raymondiibacteriota         Candidatus Raymondbacteria bacterium RifOxyA12_full_50_37

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;