RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA565584" and tax_phylum = "Candidatus Bipolaricaulota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA565584 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28753193 28753193 PRJNA565584_P_NODE_70907_length_353_cov_1.100000_g69756_i0 PRJNA565584 70907 353 1.1 3.883 Candidatus Acetothermia bacterium 2053493 Bacteria Bacteria 49.7 4.35e-4   NR RLE30301.1 2053493 g69756 i0 31.9 2.02266288951841 119 52 96 6 3 341 53 148 RLE30301.1 MAG: hypothetical protein DRJ27_03465, partial [Candidatus Acetothermia bacterium] diamond 714 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Acetothermia bacterium
30900993 30900993 PRJNA565584_P_NODE_207734_length_242_cov_1.822485_g206582_i0 PRJNA565584 207734 242 1.822485 4.4104137 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 43.5 0.00651   NR MBU1049166.1 2306012 g206582 i0 31.4 1.72314049586777 70 42 79.3 1 205 14 3 72 MBU1049166.1 helix-turn-helix domain-containing protein [Candidatus Bipolaricaulota bacterium] diamond 417 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
31090458 31090458 PRJNA565584_P_NODE_20715_length_695_cov_49.364952_g19608_i0 PRJNA565584 20715 695 49.364952 343.0864164 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 100 7.91e-24   NR MCD6142244.1 2306012 g19608 i0 69.8 0.906474820143885 63 19 27.2 0 161 349 4 66 MCD6142244.1 cold-shock protein [Candidatus Bipolaricaulota bacterium] diamond 630 100 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
31501636 31501636 PRJNA565584_P_NODE_130896_length_275_cov_1.148515_g129744_i0 PRJNA565584 130896 275 1.148515 3.15841625 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 86.3 2.75e-17   NR HIE48407.1 2306012 g129744 i0 44.4 0.981818181818182 90 50 98.2 0 270 1 632 721 HIE48407.1 hypothetical protein [Candidatus Bipolaricaulota bacterium] diamond 270 86.3 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;