RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA565584", tax_kingdom = "Metazoa" and tax_phylum = "Nematomorpha"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematomorpha · 6 ✖

tax_kingdom 1

  • Metazoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA565584 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9482637 9482637 PRJNA565584_P_NODE_101668_length_296_cov_1.789238_g100516_i0 PRJNA565584 101668 296 1.789238 5.29614448 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 130 1.23e-25   NTclustered gi|2733961662|ref|XM_065465249.1| 3053472 g100516 i0 76.744 1.54391891891892 258 44 84 14 12 260 380 130 PREDICTED: Gordionus sp. m RMFG-2023 cytochrome c-like (LOC135928786), mRNA blastn 457 130 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
10762241 10762241 PRJNA565584_P_NODE_93409_length_310_cov_1.172996_g92257_i0 PRJNA565584 93409 310 1.172996 3.6362876 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 213 1.26e-50   NTclustered gi|2733965677|ref|XM_065467221.1| 3053472 g92257 i0 83.19 24.9 232 39 75 0 1 232 384 153 PREDICTED: Gordionus sp. m RMFG-2023 serine/threonine-protein phosphatase PP1-beta catalytic subunit (LOC135930424), mRNA blastn 7719 213 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
13310818 13310818 PRJNA565584_P_NODE_36631_length_498_cov_7.724706_g35480_i0 PRJNA565584 36631 498 7.724706 38.46903588 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 122 9.86e-31   NR XP_065319472.1 3053472 g35480 i0 57.4 12.9879518072289 108 43 65.1 1 327 4 42 146 XP_065319472.1 small ribosomal subunit protein uS5-like [Gordionus sp. m RMFG-2023] diamond 6468 122 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
14584537 14584537 PRJNA565584_P_NODE_175812_length_249_cov_1.744318_g174660_i0 PRJNA565584 175812 249 1.744318 4.34335182 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 132 1.16e-35   NR XP_065321611.1 3053472 g174660 i0 68.7 3 83 26 100 0 1 249 141 223 XP_065321611.1 small ribosomal subunit protein RACK1-like [Gordionus sp. m RMFG-2023] diamond 747 132 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
28279402 28279402 PRJNA565584_P_NODE_74326_length_344_cov_7.483395_g73175_i0 PRJNA565584 74326 344 7.483395 25.7428788 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 123 1.26e-33   NR XP_065322390.1 3053472 g73175 i0 73.3 0.75 86 23 75 0 274 17 26 111 XP_065322390.1 small ribosomal subunit protein eS25-like [Gordionus sp. m RMFG-2023] diamond 258 123 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
32197599 32197599 PRJNA565584_P_NODE_73898_length_345_cov_6.183824_g72747_i0 PRJNA565584 73898 345 6.183824 21.3341928 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 127 3.81e-35   NR XP_065322390.1 3053472 g72747 i0 73 0.773913043478261 89 24 77.4 0 290 24 26 114 XP_065322390.1 small ribosomal subunit protein eS25-like [Gordionus sp. m RMFG-2023] diamond 267 127 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;