RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA565584", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA565584 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27900387 27900387 PRJNA565584_P_NODE_101945_length_296_cov_1.035874_g100793_i0 PRJNA565584 101945 296 1.035874 3.06618704 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 50.4 1.05e-4   NR HVB99356.1 2052315 g100793 i0 33.3 2.84797297297297 99 52 86.1 2 1 255 140 238 HVB99356.1 TIGR00266 family protein [Candidatus Dormiibacterota bacterium] diamond 843 50.4 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29542429 29542429 PRJNA565584_P_NODE_41670_length_464_cov_1.746803_g40519_i0 PRJNA565584 41670 464 1.746803 8.10516592 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 63.2 7.48e-9   NR HKA50540.1 2052315 g40519 i0 53.6 0.362068965517241 56 26 36.2 0 292 459 101 156 HKA50540.1 ATP-dependent Clp protease proteolytic subunit [Candidatus Dormiibacterota bacterium] diamond 168 63.2 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31388820 31388820 PRJNA565584_P_NODE_52156_length_412_cov_1.129794_g51005_i0 PRJNA565584 52156 412 1.129794 4.65475128 FCB group 1783270 Bacteria Bacteria 108 9.52e-25   NR HXM95422.1 2052315 g51005 i0 49.6 8.68689320388349 115 58 83.7 0 66 410 15 129 HXM95422.1 MFS transporter [Candidatus Dormiibacterota bacterium] diamond 3579 108 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;