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contig_metadata

17 rows where bioproject = "PRJNA565584", tax_clade = "delta/epsilon subdivisions" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 17 ✖

tax_clade 1

  • delta/epsilon subdivisions · 17 ✖

bioproject 1

  • PRJNA565584 · 17 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1133698 1133698 PRJNA565584_P_NODE_105961_length_291_cov_1.059633_g104809_i0 PRJNA565584 105961 291 1.059633 3.08353203 Bacteria 2 Bacteria Bacteria 296 1.13e-75   NTclustered gi|297180392|gb|GU474842.1| 710820 g104809 i0 85.315 234.034364261168 286 42 98 0 6 291 12580 12865 Uncultured delta proteobacterium HF0010_01J10 genomic sequence blastn 68104 298 0.993288590604027 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium HF0010_01J10
20959251 20959251 PRJNA565584_P_NODE_49937_length_421_cov_1.353448_g48786_i0 PRJNA565584 49937 421 1.353448 5.69801608 uncultured delta proteobacterium HF0070_10I02 710824 Bacteria Bacteria 339 2.7799999999999997e-88   NTclustered gi|297181000|gb|GU474857.1| 710824 g48786 i0 81.818 111.676959619952 429 55 99 22 1 417 6349 6766 Uncultured delta proteobacterium HF0070_10I02 genomic sequence blastn 47016 339 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium HF0070_10I02
27395636 27395636 PRJNA565584_P_NODE_148143_length_263_cov_2.142105_g146991_i0 PRJNA565584 148143 263 2.142105 5.63373615 Lujinxingia vulgaris 2600176 Bacteria Bacteria 78.2 1.65e-14   NR WP_146981867.1 2600176 g146991 i0 45.7 1.04942965779468 92 43 97 1 260 6 381 472 WP_146981867.1 hypothetical protein [Lujinxingia vulgaris] diamond 276 78.2 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Lujinxingiaceae Lujinxingia Lujinxingia vulgaris
27553024 27553024 PRJNA565584_P_NODE_108704_length_289_cov_1.282407_g107552_i0 PRJNA565584 108704 289 1.282407 3.70615623 Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14 2013741 Bacteria Bacteria 112 2.96e-26   NR PKN56954.1 2013741 g107552 i0 67.5 0.86159169550173 83 24 86.2 1 281 33 1109 1188 PKN56954.1 MAG: hypothetical protein CVU56_13495 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14] diamond 249 112 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14
27648276 27648276 PRJNA565584_P_NODE_65724_length_366_cov_2.419795_g64573_i0 PRJNA565584 65724 366 2.419795 8.8564497 SAR324 cluster bacterium 2024889 Bacteria Bacteria 150 8.72e-44   NR HJL95153.1 2024889 g64573 i0 60.3 2.99180327868852 121 46 97.5 1 364 8 15 135 HJL95153.1 hypothetical protein [SAR324 cluster bacterium] diamond 1095 150 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       SAR324 cluster bacterium
27806147 27806147 PRJNA565584_P_NODE_46944_length_435_cov_2.116022_g45793_i0 PRJNA565584 46944 435 2.116022 9.2046957 Deltaproteobacteria bacterium ADurb.Bin2 2026735 Bacteria Bacteria 49.3 0.00147   NR OQB17778.1 1852869 g45793 i0 30.3 1.04827586206897 152 79 96.6 8 434 15 752 888 OQB17778.1 MAG: hypothetical protein BWY17_00775 [Deltaproteobacteria bacterium ADurb.Bin207] diamond 456 49.3 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium ADurb.Bin207
27963721 27963721 PRJNA565584_P_NODE_130605_length_275_cov_1.396040_g129453_i0 PRJNA565584 130605 275 1.39604 3.83911 Microvenator marinus 2600177 Bacteria Bacteria 63.2 3.66e-9   NR WP_146963142.1 2600177 g129453 i0 40.9 1.88727272727273 93 43 91.6 5 275 24 133 222 WP_146963142.1 hypothetical protein [Microvenator marinus] diamond 519 63.2 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Microvenatoraceae Microvenator Microvenator marinus
28721654 28721654 PRJNA565584_P_NODE_186207_length_247_cov_0.885057_g185055_i0 PRJNA565584 186207 247 0.885057 2.18609079 Deltaproteobacteria bacterium GWA2_57_13 1797811 Bacteria Bacteria 111 5.61e-27   NR OGP30523.1 1797811 g185055 i0 69.1 0.983805668016194 81 25 98.4 0 3 245 210 290 OGP30523.1 MAG: hypothetical protein A2038_12305 [Deltaproteobacteria bacterium GWA2_57_13] diamond 243 111 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium GWA2_57_13
29952963 29952963 PRJNA565584_P_NODE_144951_length_265_cov_2.390625_g143799_i0 PRJNA565584 144951 265 2.390625 6.33515625 Deltaproteobacteria bacterium RBG_16_54_18 1797843 Bacteria Bacteria 92 2.16e-19   NR OGP95017.1 1797843 g143799 i0 53.2 4.47169811320755 79 37 89.4 0 3 239 310 388 OGP95017.1 MAG: translation elongation factor G [Deltaproteobacteria bacterium RBG_16_54_18] diamond 1185 92 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RBG_16_54_18
30458986 30458986 PRJNA565584_P_NODE_40533_length_471_cov_1.824121_g39382_i0 PRJNA565584 40533 471 1.824121 8.59160991 Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15 1797895 Bacteria Bacteria 112 7.07e-29   NR OGQ88263.1 1797895 g39382 i0 58.4 0.56687898089172 89 37 56.7 0 81 347 5 93 OGQ88263.1 MAG: RNA-binding protein [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15] diamond 267 112 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15
30490116 30490116 PRJNA565584_P_NODE_122653_length_280_cov_1.487923_g121501_i0 PRJNA565584 122653 280 1.487923 4.1661844 SAR324 cluster bacterium 2024889 Bacteria Bacteria 58.5 1.58e-7   NR MBL7035920.1 2024889 g121501 i0 38.2 0.814285714285714 76 40 78.2 2 61 279 361 432 MBL7035920.1 hypothetical protein [SAR324 cluster bacterium] diamond 228 58.5 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       SAR324 cluster bacterium
30521666 30521666 PRJNA565584_P_NODE_142573_length_267_cov_1.567010_g141421_i0 PRJNA565584 142573 267 1.56701 4.1839167 Persicimonas caeni 2292766 Bacteria Bacteria 101 9.069999999999999e-24   NR WP_141197554.1 2292766 g141421 i0 60.2 2.79775280898876 83 33 93.3 0 250 2 43 125 WP_141197554.1 2-oxo acid dehydrogenase subunit E2 [Persicimonas caeni] diamond 747 101 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Bradymonadaceae Persicimonas Persicimonas caeni
31564997 31564997 PRJNA565584_P_NODE_193216_length_246_cov_0.890173_g192064_i0 PRJNA565584 193216 246 0.890173 2.18982558 SAR324 cluster bacterium 2024889 Bacteria Bacteria 95.5 1.01e-20   NR MBF0236561.1 2024889 g192064 i0 57 0.963414634146341 79 34 96.3 0 239 3 485 563 MBF0236561.1 long-chain-acyl-CoA synthetase [SAR324 cluster bacterium] diamond 237 95.5 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       SAR324 cluster bacterium
31691322 31691322 PRJNA565584_P_NODE_82817_length_327_cov_0.909449_g81665_i0 PRJNA565584 82817 327 0.909449 2.97389823 Bradymonadales bacterium 2099667 Bacteria Bacteria 101 5.16e-23   NR MBN1947766.1 2099667 g81665 i0 46.3 0.990825688073395 108 54 99.1 2 324 1 29 132 MBN1947766.1 CDP-alcohol phosphatidyltransferase family protein [Bradymonadales bacterium] diamond 324 101 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales     Bradymonadales bacterium
31722838 31722838 PRJNA565584_P_NODE_211617_length_241_cov_5.982143_g210465_i0 PRJNA565584 211617 241 5.982143 14.41696463 Deltaproteobacteria bacterium RBG_13_43_22 1797825 Bacteria Bacteria 83.6 3.48e-17   NR OGP50875.1 1797825 g210465 i0 50 3.02489626556017 80 40 99.6 0 241 2 183 262 OGP50875.1 MAG: DNA-formamidopyrimidine glycosylase [Deltaproteobacteria bacterium RBG_13_43_22] diamond 729 83.6 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RBG_13_43_22
32021321 32021321 PRJNA565584_P_NODE_114438_length_285_cov_1.853774_g113286_i0 PRJNA565584 114438 285 1.853774 5.2832559 Thermodesulfobacteriota 200940 Bacteria Bacteria 91.7 1.8899999999999998e-20   NR OGR14076.1 1797899 g113286 i0 57.9 4.87368421052632 76 32 80 0 284 57 108 183 OGR14076.1 MAG: adenylate kinase [Deltaproteobacteria bacterium RIFOXYB12_FULL_58_9] diamond 1389 92 0.996739130434783 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RIFOXYB12_FULL_58_9
32292735 32292735 PRJNA565584_P_NODE_157519_length_257_cov_1.771739_g156367_i0 PRJNA565584 157519 257 1.771739 4.55336923 Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_63_12 1973967 Bacteria Bacteria 44.3 0.0128   NR PJB41402.1 1973967 g156367 i0 34.4 0.712062256809339 61 33 63 1 226 65 194 254 PJB41402.1 MAG: hypothetical protein CO108_13165 [Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_63_12] diamond 183 44.3 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_63_12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;