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contig_metadata

7 rows where bioproject = "PRJNA565584", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 7 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 7 ✖

bioproject 1

  • PRJNA565584 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10760051 10760051 PRJNA565584_P_NODE_177169_length_249_cov_0.875000_g176017_i0 PRJNA565584 177169 249 0.875 2.17875 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 86.7 4.05e-19   NR HSV29188.1 2035772 g176017 i0 73.3 0.903614457831325 75 20 90.4 0 2 226 103 177 HSV29188.1 F0F1 ATP synthase subunit B [Candidatus Omnitrophota bacterium] diamond 225 86.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27205635 27205635 PRJNA565584_P_NODE_65222_length_368_cov_1.040678_g64071_i0 PRJNA565584 65222 368 1.040678 3.82969504 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 45.4 0.0181   NR MFA5499444.1 2035772 g64071 i0 28.4 0.717391304347826 88 60 71.7 2 2 265 1859 1943 MFA5499444.1 PEP/pyruvate-binding domain-containing protein [Candidatus Omnitrophota bacterium] diamond 264 45.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27584928 27584928 PRJNA565584_P_NODE_54344_length_403_cov_2.039394_g53193_i0 PRJNA565584 54344 403 2.039394 8.21875782 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 68.6 2.27e-10   NR MFA5143646.1 2035772 g53193 i0 34.4 0.90818858560794 122 69 90.8 4 37 402 2207 2317 MFA5143646.1 glucose-6-phosphate isomerase family protein [Candidatus Omnitrophota bacterium] diamond 366 68.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27806070 27806070 PRJNA565584_P_NODE_160544_length_255_cov_1.692308_g159392_i0 PRJNA565584 160544 255 1.692308 4.3153854 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42.7 0.0417   NR MBU3959075.1 2035772 g159392 i0 47.4 0.670588235294118 57 29 67.1 1 61 231 222 277 MBU3959075.1 threonine synthase [Candidatus Omnitrophota bacterium] diamond 171 42.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30124460 30124460 PRJNA565584_P_NODE_55532_length_399_cov_1.297546_g54381_i0 PRJNA565584 55532 399 1.297546 5.17720854 Pseudomonadati 3379134 Bacteria Bacteria 58.9 3.48e-7   NR HOY09570.1 2035772 g54381 i0 30.8 1.90977443609023 91 63 68.4 0 41 313 207 297 HOY09570.1 PDZ domain-containing protein [Candidatus Omnitrophota bacterium] diamond 762 58.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30237350 30237350 PRJNA565584_P_NODE_147012_length_264_cov_1.612565_g145860_i0 PRJNA565584 147012 264 1.612565 4.2571716 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 119 1.9499999999999999e-31   NR MBN1688043.1 2035772 g145860 i0 61.6 2.94318181818182 86 33 97.7 0 3 260 8 93 MBN1688043.1 superoxide dismutase [Fe] [Candidatus Omnitrophota bacterium] diamond 777 119 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31311642 31311642 PRJNA565584_P_NODE_201075_length_244_cov_0.900585_g199923_i0 PRJNA565584 201075 244 0.900585 2.1974274 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 79.7 1.88e-17   NR MSR77670.1 2035772 g199923 i0 42.5 0.897540983606557 73 40 89.8 1 235 17 1 71 MSR77670.1 glutaredoxin 3 [Candidatus Omnitrophota bacterium] diamond 219 79.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;