RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA565584", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 8 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 8 ✖

bioproject 1

  • PRJNA565584 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14584180 14584180 PRJNA565584_P_NODE_15592_length_824_cov_2.103862_g14530_i0 PRJNA565584 15592 824 2.103862 17.33582288 Bacteria 2 Bacteria Bacteria 291 3.829999999999998e-96   NR WP_237099245.1 35801 g14530 i0 61.5 9.31310679611651 213 78 77.5 1 89 727 3 211 WP_237099245.1 peroxiredoxin [Nitrospina gracilis] diamond 7674 293 0.993174061433447 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae Nitrospina Nitrospina gracilis
20260293 20260293 PRJNA565584_P_NODE_121036_length_281_cov_1.480769_g119884_i0 PRJNA565584 121036 281 1.480769 4.16096089 Nitrospinales bacterium 2833568 Bacteria Bacteria 64.7 1.07e-9   NR MFQ5716009.1 2833568 g119884 i0 63.8 0.918149466192171 47 13 45.9 1 129 1 7 53 MFQ5716009.1 ATP-dependent protease ATPase subunit HslU [Nitrospinales bacterium] diamond 258 64.7 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales     Nitrospinales bacterium
27490339 27490339 PRJNA565584_P_NODE_94583_length_308_cov_1.302128_g93431_i0 PRJNA565584 94583 308 1.302128 4.01055424 Nitrospinaceae bacterium 2358456 Bacteria Bacteria 116 4.3e-29   NR MDP6335571.1 2358456 g93431 i0 61.4 1.97727272727273 101 29 98.4 2 2 304 88 178 MDP6335571.1 formimidoylglutamase [Nitrospinaceae bacterium] diamond 609 116 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae   Nitrospinaceae bacterium
27900428 27900428 PRJNA565584_P_NODE_148285_length_263_cov_1.921053_g147133_i0 PRJNA565584 148285 263 1.921053 5.05236939 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 72 2.39e-12   NR MDH3599914.1 2528274 g147133 i0 44 0.958174904942966 84 47 95.8 0 252 1 512 595 MDH3599914.1 hypothetical protein [Candidatus Tectimicrobiota bacterium] diamond 252 72 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
28608993 28608993 PRJNA565584_P_NODE_73887_length_346_cov_0.717949_g72736_i0 PRJNA565584 73887 346 0.717949 2.48410354 Nitrospina 35800 Bacteria Bacteria 131 3.639999999999999e-35   NR MBT6345782.1 2024844 g72736 i0 59.8 9.89306358381503 102 41 88.4 0 311 6 9 110 MBT6345782.1 alkene reductase [Nitrospina sp.] diamond 3423 131 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae Nitrospina Nitrospina sp.
31785915 31785915 PRJNA565584_P_NODE_133117_length_273_cov_1.920000_g131965_i0 PRJNA565584 133117 273 1.92 5.2416 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 77 4.52e-14   NR MDH3603170.1 2528274 g131965 i0 45.2 1.81318681318681 84 46 92.3 0 272 21 308 391 MDH3603170.1 UvrD-helicase domain-containing protein [Candidatus Tectimicrobiota bacterium] diamond 495 77 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
32292731 32292731 PRJNA565584_P_NODE_151859_length_261_cov_1.478723_g150707_i0 PRJNA565584 151859 261 1.478723 3.85946703 Nitrospinota bacterium 2026769 Bacteria Bacteria 44.7 0.00902   NR MFQ5693793.1 2026769 g150707 i0 38.5 0.896551724137931 78 46 88.5 2 15 245 128 204 MFQ5693793.1 hypothetical protein [Nitrospinota bacterium] diamond 234 44.7 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
32450806 32450806 PRJNA565584_P_NODE_144119_length_266_cov_1.564767_g142967_i0 PRJNA565584 144119 266 1.564767 4.16228022 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 146 3.93e-39   NR MEE8303395.1 2528274 g142967 i0 79.5 2.97744360902256 88 18 99.2 0 1 264 107 194 MEE8303395.1 gamma-glutamyltransferase [Candidatus Tectimicrobiota bacterium] diamond 792 146 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;