RNAquarium Metadata Server
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contig_metadata

18 rows where bioproject = "PRJNA565584", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 18 ✖

tax_clade 1

  • Metamonada · 18 ✖

bioproject 1

  • PRJNA565584 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9482610 9482610 PRJNA565584_P_NODE_10008_length_1071_cov_6.677355_g9099_i0 PRJNA565584 10008 1071 6.677355 71.51447205 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 62.1 1.81e-4   NTclustered gi|2806442743|ref|XM_068514405.1| 1144522 g9099 i0 88.462 0.0830999066293184 52 5 5 1 885 935 839 890 Tritrichomonas foetus Digestive cysteine proteinase 1 (LCP1), partial mRNA blastn 89 62.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
9483566 9483566 PRJNA565584_P_NODE_148888_length_263_cov_1.405263_g147736_i0 PRJNA565584 148888 263 1.405263 3.69584169 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 125 4.04e-34   NR XP_067774515.1 135588 g147736 i0 61.6 49.0836501901141 86 33 98.1 0 261 4 26 111 XP_067774515.1 Ras-related protein RABD1 [Histomonas meleagridis] diamond 12909 125 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
18408023 18408023 PRJNA565584_P_NODE_197495_length_245_cov_0.895349_g196343_i0 PRJNA565584 197495 245 0.895349 2.19360505 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 58.4 4.75e-4   NTclustered gi|2806481198|ref|XM_068511487.1| 1144522 g196343 i0 100 0.126530612244898 31 0 13 0 6 36 307 277 Tritrichomonas foetus Ras-related protein Rab-6.1 (TRFO_37538), partial mRNA blastn 31 58.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27364202 27364202 PRJNA565584_P_NODE_212643_length_241_cov_1.553571_g211491_i0 PRJNA565584 212643 241 1.553571 3.74410611 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 48.9 2.3e-4   NR XP_068357846.1 1144522 g211491 i0 59.1 0.547717842323652 44 14 49.8 2 239 120 394 437 XP_068357846.1 Eukaryotic peptide chain release factor subunit 1-1 [Tritrichomonas foetus] diamond 132 48.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27566924 27566924 PRJNA565584_P_NODE_81364_length_329_cov_5.031250_g80212_i0 PRJNA565584 81364 329 5.03125 16.5528125 root 1 Root_unresolved Root_unresolved 53.1 1.08e-5   NR XP_001317694.2 412133 g80212 i0 50 2.0516717325228 60 27 52 2 209 39 115 174 XP_001317694.2 Golgi to endosome transport [Trichomonas vaginalis G3] diamond 675 53.1 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28311232 28311232 PRJNA565584_P_NODE_28126_length_580_cov_2.510848_g26983_i0 PRJNA565584 28126 580 2.510848 14.5629184 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 75.5 1.88e-12   NR XP_067776431.1 135588 g26983 i0 35.6 2.76206896551724 146 85 71.9 6 35 451 146 289 XP_067776431.1 SHIPPO repeat domain-containing protein [Histomonas meleagridis] diamond 1602 75.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
28577398 28577398 PRJNA565584_P_NODE_75067_length_343_cov_1.140741_g73916_i0 PRJNA565584 75067 343 1.140741 3.91274163 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 84.7 3.18e-17   NR BEJ44983.1 63628 g73916 i0 41 1.78425655976676 100 58 87.5 1 329 30 1 99 BEJ44983.1 CAMK family protein kinase, partial [Trichonympha agilis] diamond 612 84.7 1 Eukaryota Metamonada   Parabasalia   Trichonymphida Trichonymphidae Trichonympha Trichonympha agilis
28847676 28847676 PRJNA565584_P_NODE_179808_length_248_cov_2.874286_g178656_i0 PRJNA565584 179808 248 2.874286 7.12822928 Trichomitus batrachorum 5732 Parabasalia other_Eukaryota 77.8 1e-14   NR AAD45330.1 5732 g178656 i0 51.2 0.991935483870968 82 40 99.2 0 1 246 43 124 AAD45330.1 enolase 2, partial [Trichomitus batrachorum] diamond 246 77.8 1 Eukaryota Metamonada   Parabasalia   Hypotrichomonadida Hypotrichomonadidae Trichomitus Trichomitus batrachorum
29082683 29082683 PRJNA565584_P_NODE_40828_length_469_cov_1.901515_g39677_i0 PRJNA565584 40828 469 1.901515 8.91810535 Tritrichomonadida 740972 Parabasalia other_Eukaryota 94.4 8.33e-21   NR XP_067772851.1 135588 g39677 i0 30.9 2.87846481876333 149 101 94.7 2 21 464 9 156 XP_067772851.1 small GTP-binding protein [Histomonas meleagridis] diamond 1350 94.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
29227055 29227055 PRJNA565584_P_NODE_74229_length_345_cov_1.132353_g73078_i0 PRJNA565584 74229 345 1.132353 3.90661785 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 53.9 1.45e-5   NR XP_068346590.1 1144522 g73078 i0 35.8 0.826086956521739 95 51 73.9 2 20 274 724 818 XP_068346590.1 uncharacterized protein TRFO_40274 [Tritrichomonas foetus] diamond 285 53.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29258042 29258042 PRJNA565584_P_NODE_142449_length_267_cov_1.587629_g141297_i0 PRJNA565584 142449 267 1.587629 4.23896943 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 51.6 3.76e-5   NR XP_067778796.1 135588 g141297 i0 40.8 1.60674157303371 71 37 79.8 1 216 4 192 257 XP_067778796.1 TKL family protein kinase [Histomonas meleagridis] diamond 429 51.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
29745360 29745360 PRJNA565584_P_NODE_181170_length_248_cov_1.314286_g180018_i0 PRJNA565584 181170 248 1.314286 3.25942928 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 75.9 4.02e-15   NR XP_001315258.1 412133 g180018 i0 52.9 6.12096774193548 70 33 84.7 0 3 212 31 100 XP_001315258.1 RNA binding [Trichomonas vaginalis G3] diamond 1518 75.9 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
30553146 30553146 PRJNA565584_P_NODE_170013_length_251_cov_0.865169_g168861_i0 PRJNA565584 170013 251 0.865169 2.17157419 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 77 3.12e-14   NR XP_001319861.1 412133 g168861 i0 47.6 1.97211155378486 82 42 98 1 247 2 119 199 XP_001319861.1 protein serine/threonine kinase protein [Trichomonas vaginalis G3] diamond 495 77 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
30616341 30616341 PRJNA565584_P_NODE_111573_length_287_cov_1.439252_g110421_i0 PRJNA565584 111573 287 1.439252 4.13065324 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 63.5 3.03e-9   NR XP_068354695.1 1144522 g110421 i0 34.1 0.951219512195122 91 52 95.1 2 6 278 462 544 XP_068354695.1 uncharacterized protein TRFO_31534 [Tritrichomonas foetus] diamond 273 63.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30774631 30774631 PRJNA565584_P_NODE_172194_length_250_cov_0.870056_g171042_i0 PRJNA565584 172194 250 0.870056 2.17514 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 50.4 8.01e-5   NR XP_068349620.1 1144522 g171042 i0 42.6 0.648 54 31 64.8 0 22 183 834 887 XP_068349620.1 uncharacterized protein TRFO_37341 [Tritrichomonas foetus] diamond 162 50.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31216354 31216354 PRJNA565584_P_NODE_107275_length_290_cov_1.193548_g106123_i0 PRJNA565584 107275 290 1.193548 3.4612892 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 45.1 0.00789   NR XP_001305731.1 412133 g106123 i0 51.4 0.744827586206897 37 18 38.3 0 148 38 34 70 XP_001305731.1 Rab GTPase binding [Trichomonas vaginalis G3] diamond 216 45.1 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32039244 32039244 PRJNA565584_P_NODE_102318_length_295_cov_1.846847_g101166_i0 PRJNA565584 102318 295 1.846847 5.44819865 Tritrichomonas suis 56690 Parabasalia other_Eukaryota 102 7.31e-24   NR BAL49625.1 56690 g101166 i0 53.1 3.95593220338983 98 45 99.7 1 1 294 59 155 BAL49625.1 actin, partial [Tritrichomonas suis] diamond 1167 102 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas suis
32622202 32622202 PRJNA565584_P_NODE_35380_length_509_cov_1.763761_g34229_i0 PRJNA565584 35380 509 1.763761 8.97754349 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 114 7.19e-26   NR XP_001305523.1 412133 g34229 i0 50.9 6.4007858546169 110 53 64.8 1 331 2 46 154 XP_001305523.1 phenylalanyl-tRNA synthetase beta chain and leucine-rich repeat-containing protein 47 family [Trichomonas vaginalis G3] diamond 3258 114 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;