RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA565584" and tax_clade = "Marine virus AFVG"

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tax_superkingdom 1

tax_clade 1

  • Marine virus AFVG · 1 ✖

bioproject 1

  • PRJNA565584 · 1 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13309147 13309147 PRJNA565584_P_NODE_144451_length_266_cov_1.279793_g143299_i0 PRJNA565584 144451 266 1.279793 3.40424938 Marine virus AFVG_250M168 2693296 Viruses Viruses 62.1 4.04e-5   NTclustered gi|1789809613|gb|MN693969.1| 2693296 g143299 i0 100 0.240601503759398 33 0 13 0 156 188 29429 29461 MAG: Marine virus AFVG_250M168, complete genome blastn 64 62.1 1 Viruses Marine virus AFVG             Marine virus AFVG_250M168

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;