RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA565584", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 5 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 5 ✖

bioproject 1

  • PRJNA565584 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27648123 27648123 PRJNA565584_P_NODE_116804_length_284_cov_1.146919_g115652_i0 PRJNA565584 116804 284 1.146919 3.2572499600000002 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 78.6 1.55e-14   NR HYM20980.1 2447898 g115652 i0 64.3 0.73943661971831 70 24 72.9 1 2 208 412 481 HYM20980.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 210 78.6 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29100527 29100527 PRJNA565584_P_NODE_162048_length_254_cov_1.701657_g160896_i0 PRJNA565584 162048 254 1.701657 4.32220878 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 106 7.71e-25   NR HEY6171372.1 2447898 g160896 i0 60.7 0.992125984251969 84 33 99.2 0 253 2 313 396 HEY6171372.1 aminopeptidase P N-terminal domain-containing protein [Candidatus Kapaibacterium sp.] diamond 252 106 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30174094 30174094 PRJNA565584_P_NODE_196172_length_245_cov_0.895349_g195020_i0 PRJNA565584 196172 245 0.895349 2.19360505 Candidatus Kapaibacterium thiocyanatum 1895771 Bacteria Bacteria 158 8.459999999999999e-47   NR MBN9399880.1 1895771 g195020 i0 100 0.991836734693878 81 0 99.2 0 2 244 40 120 MBN9399880.1 TetR/AcrR family transcriptional regulator [Candidatus Kapaibacterium thiocyanatum] diamond 243 158 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium thiocyanatum
31293746 31293746 PRJNA565584_P_NODE_72575_length_349_cov_1.090580_g71424_i0 PRJNA565584 72575 349 1.09058 3.8061242 FCB group 1783270 Bacteria Bacteria 47.8 0.00158   NR MCS6807401.1 2447898 g71424 i0 38.6 1.4785100286533 57 35 49 0 178 348 128 184 MCS6807401.1 aquaporin [Candidatus Kapaibacterium sp.] diamond 516 47.8 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31817680 31817680 PRJNA565584_P_NODE_180417_length_248_cov_1.760000_g179265_i0 PRJNA565584 180417 248 1.76 4.3648 Candidatus Kapaibacterium thiocyanatum 1895771 Bacteria Bacteria 90.1 8.29e-19   NR MBN9398818.1 1895771 g179265 i0 100 0.532258064516129 44 0 53.2 0 246 115 565 608 MBN9398818.1 hypothetical protein [Candidatus Kapaibacterium thiocyanatum] diamond 132 90.1 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium thiocyanatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;