RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA565584", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA565584 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26826431 26826431 PRJNA565584_P_NODE_26541_length_600_cov_2.487666_g25401_i0 PRJNA565584 26541 600 2.487666 14.925996 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 123 9.59e-32   NR MBN2830161.1 2030808 g25401 i0 43.5 1.485 154 79 73.5 5 508 68 18 170 MBN2830161.1 lipocalin family protein [Candidatus Cloacimonadota bacterium] diamond 891 123 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
27977422 27977422 PRJNA565584_P_NODE_195685_length_245_cov_0.895349_g194533_i0 PRJNA565584 195685 245 0.895349 2.19360505 Bacteria 2 Bacteria Bacteria 53.9 1.84e-6   NR HOQ80634.1 2030808 g194533 i0 45.8 1.44489795918367 59 30 72.2 1 207 31 48 104 HOQ80634.1 tetratricopeptide repeat protein [Candidatus Cloacimonadota bacterium] diamond 354 53.9 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
27995440 27995440 PRJNA565584_P_NODE_177585_length_249_cov_0.875000_g176433_i0 PRJNA565584 177585 249 0.875 2.17875 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 45.8 0.00319   NR MBC8526123.1 2030808 g176433 i0 40.4 0.566265060240964 47 21 48.2 1 224 105 124 170 MBC8526123.1 alginate lyase family protein [Candidatus Cloacimonadota bacterium] diamond 141 45.8 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
29479018 29479018 PRJNA565584_P_NODE_134270_length_272_cov_3.125628_g133118_i0 PRJNA565584 134270 272 3.125628 8.50170816 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 86.7 1.02e-18   NR HOV17331.1 2030808 g133118 i0 62.2 1.63235294117647 74 27 80.5 1 219 1 2 75 HOV17331.1 NAD(P)H:quinone oxidoreductase [Candidatus Cloacimonadota bacterium] diamond 444 86.7 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;