RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA565584", tax_clade = "Candidatus Pacearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_kingdom 1

tax_clade 1

  • Candidatus Pacearchaeota · 2 ✖

bioproject 1

  • PRJNA565584 · 2 ✖

analysis 1

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29353189 29353189 PRJNA565584_P_NODE_210729_length_242_cov_0.911243_g209577_i0 PRJNA565584 210729 242 0.911243 2.20520806 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 42 0.028   NR MFA5071359.1 2026773 g209577 i0 40 0.557851239669422 45 26 54.5 1 3 134 85 129 MFA5071359.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 135 42 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30377798 30377798 PRJNA565584_P_NODE_180552_length_248_cov_1.720000_g179400_i0 PRJNA565584 180552 248 1.72 4.2656 root 1 Root_unresolved Root_unresolved 54.3 3.29e-6   NR MAG24166.1 2026773 g179400 i0 56.4 2.04435483870968 39 16 47.2 1 130 246 296 333 MAG24166.1 DNA ligase [Candidatus Pacearchaeota archaeon] diamond 507 54.3 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;