RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA565584", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA565584 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27016014 27016014 PRJNA565584_P_NODE_191902_length_246_cov_0.890173_g190750_i0 PRJNA565584 191902 246 0.890173 2.18982558 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 49.3 1.79e-4   NR MCX6578907.1 2052149 g190750 i0 38.3 0.731707317073171 60 37 73.2 0 16 195 39 98 MCX6578907.1 hypothetical protein [Candidatus Aminicenantes bacterium] diamond 180 49.3 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
29587433 29587433 PRJNA565584_P_NODE_185350_length_247_cov_1.574713_g184198_i0 PRJNA565584 185350 247 1.574713 3.88954111 Bacteria 2 Bacteria Bacteria 115 2.17e-28   NR MFQ5722403.1 3090891 g184198 i0 63.4 6.95951417004049 82 30 99.6 0 246 1 105 186 MFQ5722403.1 saccharopine dehydrogenase C-terminal domain-containing protein [Candidatus Aminicenantales bacterium] diamond 1719 116 0.991379310344828 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota Candidatus Aminicenantia Candidatus Aminicenantales     Candidatus Aminicenantales bacterium
30174017 30174017 PRJNA565584_P_NODE_110592_length_288_cov_1.074419_g109440_i0 PRJNA565584 110592 288 1.074419 3.09432672 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 70.9 7.94e-12   NR MCK4557894.1 2052149 g109440 i0 38.8 3.16666666666667 103 53 96.9 2 3 281 362 464 MCK4557894.1 trypsin-like peptidase domain-containing protein [Candidatus Aminicenantes bacterium] diamond 912 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
31691189 31691189 PRJNA565584_P_NODE_134997_length_272_cov_1.547739_g133845_i0 PRJNA565584 134997 272 1.547739 4.20985008 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 43.1 0.0364   NR MCK4764623.1 2052149 g133845 i0 89.5 0.441176470588235 19 2 21 0 271 215 323 341 MCK4764623.1 L-threonine 3-dehydrogenase [Candidatus Aminicenantes bacterium] diamond 120 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;