RNAquarium Metadata Server
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contig_metadata

16 rows where bioproject = "PRJNA564810" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA564810 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12033290 12033290 PRJNA564810_S_NODE_2170_length_329_cov_2.268939_g2148_i0 PRJNA564810 2170 329 2.268939 7.46480931 Opisthokonta 33154 Mollusca Mollusca 129 3.42e-33   NR WAR25636.1 6604 g2148 i0 80.9 4.96048632218845 68 13 62 0 329 126 338 405 WAR25636.1 MAP2-like protein [Mya arenaria] diamond 1632 130 0.992307692307692 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
15856853 15856853 PRJNA564810_S_NODE_4933_length_255_cov_1.542105_g4911_i0 PRJNA564810 4933 255 1.542105 3.93236775 Pomacea canaliculata 400727 Mollusca Mollusca 54.7 0.006   NTclustered gi|1397730177|ref|XM_025256400.1| 400727 g4911 i0 100 0.341176470588235 29 0 11 0 93 121 1176 1148 PREDICTED: Pomacea canaliculata protein FAM102A-like (LOC112574958), transcript variant X3, mRNA blastn 87 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
20956274 20956274 PRJNA564810_S_NODE_4757_length_258_cov_1.756477_g4735_i0 PRJNA564810 4757 258 1.756477 4.53171066 Aplysia californica 6500 Mollusca Mollusca 84.7 7.52e-17   NR XP_005105873.1 6500 g4735 i0 65.6 3.54651162790698 61 19 70.9 2 255 73 489 547 XP_005105873.1 digestive cysteine proteinase 1 [Aplysia californica] diamond 915 85.5 0.990643274853801 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
23506498 23506498 PRJNA564810_S_NODE_1279_length_378_cov_12.744409_g1257_i0 PRJNA564810 1279 378 12.744409 48.17386602 Metazoa 33208 Mollusca Mollusca 164 7.24e-47   NR XP_052764962.1 6604 g1257 i0 73.3 13.4603174603175 101 27 80.2 0 373 71 234 334 XP_052764962.1 cathepsin B-like [Mya arenaria] diamond 5088 165 0.993939393939394 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
23506506 23506506 PRJNA564810_S_NODE_4259_length_268_cov_1.339901_g4237_i0 PRJNA564810 4259 268 1.339901 3.59093468 Bradybaena similaris 145626 Mollusca Mollusca 58.4 5.27e-4   NTclustered gi|2912985489|dbj|AP039590.1| 145626 g4237 i0 97.059 0.126865671641791 34 1 13 0 192 225 44400296 44400263 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 9, sequence blastn 34 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
26808351 26808351 PRJNA564810_S_NODE_1201_length_384_cov_13.987461_g1179_i0 PRJNA564810 1201 384 13.987461 53.71185024 Metazoa 33208 Mollusca Mollusca 108 3.04e-26   NR XP_052087583.1 6549 g1179 i0 71.2 7.328125 73 21 57 0 382 164 183 255 XP_052087583.1 40S ribosomal protein S4-like isoform X1 [Mytilus californianus] diamond 2814 109 0.990825688073395 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
27504040 27504040 PRJNA564810_S_NODE_5623_length_243_cov_1.269663_g5601_i0 PRJNA564810 5623 243 1.269663 3.08528109 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 73.6 5.24e-13   NR XP_033726568.1 6579 g5601 i0 67.9 6.69135802469136 53 16 64.2 1 1 156 465 517 XP_033726568.1 inositol-3-phosphate synthase 1-A-like [Pecten maximus] diamond 1626 73.9 0.995940460081191 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
27711571 27711571 PRJNA564810_S_NODE_3864_length_276_cov_2.023697_g3842_i0 PRJNA564810 3864 276 2.023697 5.58540372 Saccostrea echinata 191078 Mollusca Mollusca 54.3 8.14e-7   NR XP_061169722.1 191078 g3842 i0 45.5 0.478260869565217 44 24 47.8 0 274 143 86 129 XP_061169722.1 von Willebrand factor A domain-containing protein 5A-like [Saccostrea echinata] diamond 132 54.3 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea echinata
27837268 27837268 PRJNA564810_S_NODE_4424_length_264_cov_1.587940_g4402_i0 PRJNA564810 4424 264 1.58794 4.1921616 Elysia crispata 231223 Mollusca Mollusca 53.1 1.05e-5   NR KAK3767218.1 231223 g4402 i0 61.9 0.477272727272727 42 16 47.7 0 55 180 533 574 KAK3767218.1 hypothetical protein RRG08_018088 [Elysia crispata] diamond 126 53.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia crispata
28500589 28500589 PRJNA564810_S_NODE_2787_length_305_cov_1.983333_g2765_i0 PRJNA564810 2787 305 1.983333 6.04916565 Gigantopelta aegis 1735272 Mollusca Mollusca 61.2 2.46e-8   NR XP_041369682.1 1735272 g2765 i0 36.4 1.74098360655738 88 54 86.6 2 5 268 649 734 XP_041369682.1 uncharacterized protein LOC121383654 [Gigantopelta aegis] diamond 531 61.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
28500590 28500590 PRJNA564810_S_NODE_3847_length_276_cov_3.265403_g3825_i0 PRJNA564810 3847 276 3.265403 9.01251228 Patella vulgata 6465 Mollusca Mollusca 68.2 6.12e-11   NR XP_050394025.1 6465 g3825 i0 38.2 2.32608695652174 68 42 73.9 0 251 48 489 556 XP_050394025.1 neuroligin-4, X-linked [Patella vulgata] diamond 642 68.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
29258013 29258013 PRJNA564810_S_NODE_789_length_433_cov_4.635870_g767_i0 PRJNA564810 789 433 4.63587 20.0733171 Mytilus coruscus 42192 Mollusca Mollusca 105 2.2899999999999998e-23   NR CAC5369506.1 42192 g767 i0 44.5 1.46189376443418 110 60 75.5 1 50 376 476 585 CAC5369506.1 TXNDC5 [Mytilus coruscus] diamond 633 105 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus coruscus
29903592 29903592 PRJNA564810_S_NODE_6071_length_236_cov_1.438596_g6049_i0 PRJNA564810 6071 236 1.438596 3.39508656 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 139 3.98e-38   NR KAL5007246.1 13268 g6049 i0 76.9 20.8220338983051 78 18 99.2 0 235 2 15 92 KAL5007246.1 hypothetical protein ScPMuIL_016052 [Solemya velum] diamond 4914 140 0.992857142857143 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Solemyida Solemyidae Solemya Solemya velum
32211200 32211200 PRJNA564810_S_NODE_3738_length_279_cov_1.509346_g3716_i0 PRJNA564810 3738 279 1.509346 4.21107534 Mollusca 6447 Mollusca Mollusca 53.9 2.41e-6   NR XP_005100682.1 6500 g3716 i0 65.9 2.90322580645161 41 14 44.1 0 62 184 119 159 XP_005100682.1 vitamin K epoxide reductase complex subunit 1 [Aplysia californica] diamond 810 53.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
32369552 32369552 PRJNA564810_S_NODE_5179_length_250_cov_2.929730_g5157_i0 PRJNA564810 5179 250 2.92973 7.324325 Lepetellida 2315723 Mollusca Mollusca 48.9 2.75e-4   NR XP_046546500.1 36100 g5157 i0 52.3 2.112 44 16 52.8 2 250 119 552 590 XP_046546500.1 anti-sigma-I factor RsgI6-like [Haliotis rubra] diamond 528 48.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rubra
32590873 32590873 PRJNA564810_S_NODE_5819_length_240_cov_1.542857_g5797_i0 PRJNA564810 5819 240 1.542857 3.7028568 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 78.6 9.61e-16   NR XP_062620663.1 36930 g5797 i0 60.3 11.9875 63 25 78.8 0 1 189 144 206 XP_062620663.1 T-complex protein 1 subunit beta-like, partial [Saccostrea cuccullata] diamond 2877 79 0.994936708860759 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;