RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA564810" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA564810 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27900383 27900383 PRJNA564810_S_NODE_8185_length_209_cov_2.361111_g8163_i0 PRJNA564810 8185 209 2.361111 4.93472199 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 121 9.02e-32   NR ETO17605.1 46433 g8163 i0 88.4 0.990430622009569 69 8 99 0 3 209 37 105 ETO17605.1 Flagellar capping protein, partial [Reticulomyxa filosa] diamond 207 121 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29745334 29745334 PRJNA564810_S_NODE_1150_length_389_cov_1.910494_g1128_i0 PRJNA564810 1150 389 1.910494 7.43182166 Eustigmatales 425074 SAR_Eukaryotes SAR_Eukaryotes 102 1.19e-22   NR ETO07780.1 46433 g1128 i0 46.8 2.52185089974293 111 57 84.1 1 2 328 357 467 ETO07780.1 hypothetical protein RFI_29612 [Reticulomyxa filosa] diamond 981 103 0.990291262135922 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;