RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJNA564810" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA564810 · 13 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1829665 1829665 PRJNA564810_S_NODE_7762_length_215_cov_1.813333_g7740_i0 PRJNA564810 7762 215 1.813333 3.89866595 Evosea 2605435 Evosea other_Eukaryota 129 6.17e-36   NR P34729.1 5791 g7740 i0 87.3 13.8697674418605 71 9 99.1 0 215 3 46 116 P34729.1 RecName: Full=Ras-like protein 1; Flags: Precursor [Physarum polycephalum] diamond 2982 129 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
27725231 27725231 PRJNA564810_S_NODE_5924_length_238_cov_2.595376_g5902_i0 PRJNA564810 5924 238 2.595376 6.17699488 Eumycetozoa 142796 Evosea other_Eukaryota 78.6 8.31e-15   NR XP_004359978.1 261658 g5902 i0 58.9 7.09663865546218 56 23 70.6 0 3 170 775 830 XP_004359978.1 phospholipase D3 [Cavenderia fasciculata] diamond 1689 78.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28089945 28089945 PRJNA564810_S_NODE_8025_length_212_cov_4.571429_g8003_i0 PRJNA564810 8025 212 4.571429 9.69142948 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 70.1 5.59e-12   NR XP_012758387.1 1410327 g8003 i0 62.2 0.636792452830189 45 17 63.7 0 1 135 514 558 XP_012758387.1 hypothetical protein SAMD00019534_009660 [Acytostelium subglobosum LB1] diamond 135 70.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
28514216 28514216 PRJNA564810_S_NODE_6407_length_231_cov_1.638554_g6385_i0 PRJNA564810 6407 231 1.638554 3.78505974 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 45.1 0.00459   NR AAB69635.1 44689 g6385 i0 40 2.97402597402597 60 33 74 1 3 173 235 294 AAB69635.1 random slug cDNA5 protein [Dictyostelium discoideum] diamond 687 45.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
28942789 28942789 PRJNA564810_S_NODE_2748_length_306_cov_3.029046_g2726_i0 PRJNA564810 2748 306 3.029046 9.26888076 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 120 4.46e-30   NR PRP81227.1 1890364 g2726 i0 73.1 4.53921568627451 78 21 76.5 0 1 234 310 387 PRP81227.1 S-adenosylmethionine synthetase [Planoprotostelium fungivorum] diamond 1389 120 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29777055 29777055 PRJNA564810_S_NODE_4471_length_263_cov_2.111111_g4449_i0 PRJNA564810 4471 263 2.111111 5.55222193 Eumycetozoa 142796 Evosea other_Eukaryota 75.9 5.14e-14   NR XP_003289519.1 5786 g4449 i0 80 7.4828897338403 45 9 51.3 0 209 75 262 306 XP_003289519.1 translation initiation factor eIF-2B alpha subunit [Dictyostelium purpureum] diamond 1968 75.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
30269153 30269153 PRJNA564810_S_NODE_5132_length_251_cov_3.639785_g5110_i0 PRJNA564810 5132 251 3.639785 9.13586035 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 55.5 2.29e-7   NR KYQ92647.1 361077 g5110 i0 46.6 0.693227091633466 58 29 69.3 1 250 77 74 129 KYQ92647.1 thioredoxin fold domain-containing protein [Tieghemostelium lacteum] diamond 174 55.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30458863 30458863 PRJNA564810_S_NODE_4373_length_265_cov_1.810000_g4351_i0 PRJNA564810 4373 265 1.81 4.7965 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 73.9 6.29e-14   NR PRP78962.1 1890364 g4351 i0 37 0.826415094339623 73 46 82.6 0 223 5 113 185 PRP78962.1 eukaryotic translation initiation factor 4E-2-like [Planoprotostelium fungivorum] diamond 219 73.9 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30616328 30616328 PRJNA564810_S_NODE_1613_length_356_cov_1.625430_g1591_i0 PRJNA564810 1613 356 1.62543 5.7865308 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 63.5 5.98e-9   NR KAH3760039.1 1580589 g1591 i0 54.3 1.15449438202247 46 19 37.1 1 353 222 319 364 KAH3760039.1 pectin acetylesterase [Pelomyxa schiedti] diamond 411 63.5 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30900911 30900911 PRJNA564810_S_NODE_1714_length_350_cov_3.010526_g1692_i0 PRJNA564810 1714 350 3.010526 10.536841 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 108 1.9e-26   NR PRP77337.1 1890364 g1692 i0 50.5 0.831428571428571 97 48 83.1 0 4 294 138 234 PRP77337.1 phosducin-like protein [Planoprotostelium fungivorum] diamond 291 108 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31375016 31375016 PRJNA564810_S_NODE_3536_length_284_cov_1.136986_g3514_i0 PRJNA564810 3536 284 1.136986 3.22904024 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 63.9 2.14e-9   NR XP_012751758.1 1410327 g3514 i0 42.2 0.676056338028169 64 37 67.6 0 6 197 627 690 XP_012751758.1 hypothetical protein SAMD00019534_084130 [Acytostelium subglobosum LB1] diamond 192 63.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
31817602 31817602 PRJNA564810_S_NODE_2397_length_319_cov_1.606299_g2375_i0 PRJNA564810 2397 319 1.606299 5.12409381 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 90.9 8.01e-19   NR KYR03163.1 361077 g2375 i0 44.4 1.84326018808777 99 51 89.3 1 317 33 339 437 KYR03163.1 acid ceramidase-like protein [Tieghemostelium lacteum] diamond 588 90.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
32147912 32147912 PRJNA564810_S_NODE_2558_length_313_cov_2.467742_g2536_i0 PRJNA564810 2558 313 2.467742 7.72403246 Dictyosteliaceae 2058185 Evosea other_Eukaryota 142 4.53e-40   NR XP_003294984.1 5786 g2536 i0 72.4 8.50159744408946 98 25 93.9 1 313 20 122 217 XP_003294984.1 TATA-binding protein [Dictyostelium purpureum] diamond 2661 142 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;