RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA564810", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 5 ✖

tax_kingdom 1

  • Metazoa · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA564810 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12612480 12612480 PRJNA564810_S_NODE_7450_length_218_cov_3.320261_g7428_i0 PRJNA564810 7450 218 3.320261 7.23816898 Metazoa 33208 Echinodermata other_Eukaryota 113 8.720000000000001e-21   NTclustered gi|1752407408|ref|XM_011682867.2| 7668 g7428 i0 92.405 32.8577981651376 79 6 36 0 1 79 1343 1421 PREDICTED: Strongylocentrotus purpuratus tubulin beta chain (LOC577036), mRNA blastn 7163 113 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
26744508 26744508 PRJNA564810_S_NODE_4381_length_265_cov_1.160000_g4359_i0 PRJNA564810 4381 265 1.16 3.074 Echinoidea 7625 Echinodermata other_Eukaryota 53.1 4.98e-6   NR XP_041478753.1 7654 g4359 i0 38.1 3.58867924528302 63 39 71.3 0 23 211 128 190 XP_041478753.1 COMM domain-containing protein 3-like [Lytechinus variegatus] diamond 951 53.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
26903360 26903360 PRJNA564810_S_NODE_2561_length_313_cov_1.879032_g2539_i0 PRJNA564810 2561 313 1.879032 5.88137016 root 1 Root_unresolved Root_unresolved 89.4 9.94e-20   NR XP_022090563.1 133434 g2539 i0 52.9 10.0926517571885 87 41 83.4 0 21 281 91 177 XP_022090563.1 peroxiredoxin-5, mitochondrial-like [Acanthaster planci] diamond 3159 90.1 0.992230854605993 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
30616329 30616329 PRJNA564810_S_NODE_6213_length_234_cov_1.609467_g6191_i0 PRJNA564810 6213 234 1.609467 3.76615278 Asterias rubens 7604 Echinodermata other_Eukaryota 82.4 3.54e-16   NR XP_033625802.1 7604 g6191 i0 69.1 1.41025641025641 55 17 70.5 0 233 69 1281 1335 XP_033625802.1 xanthine dehydrogenase/oxidase-like [Asterias rubens] diamond 330 82.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
32671378 32671378 PRJNA564810_S_NODE_1880_length_342_cov_2.722022_g1858_i0 PRJNA564810 1880 342 2.722022 9.30931524 Diadema antillarum 105358 Echinodermata other_Eukaryota 82.4 7.73e-17   NR XP_071494317.1 105358 g1858 i0 50 0.736842105263158 84 42 73.7 0 342 91 106 189 XP_071494317.1 protein LZIC-like [Diadema antillarum] diamond 252 82.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;