RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA564810", tax_kingdom = "Metazoa" and tax_phylum = "Bryozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA564810 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15856854 15856854 PRJNA564810_S_NODE_5193_length_250_cov_1.832432_g5171_i0 PRJNA564810 5193 250 1.832432 4.58108 Membranipora membranacea 95170 Bryozoa other_Eukaryota 141 4.7e-29   NTclustered gi|2320635325|gb|ON868447.1| 95170 g5171 i0 91.262 39.624 103 9 41 0 148 250 19 121 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 9906 141 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea
27648105 27648105 PRJNA564810_S_NODE_2704_length_308_cov_2.382716_g2682_i0 PRJNA564810 2704 308 2.382716 7.33876528 Bugula neritina 10212 Bryozoa other_Eukaryota 70.9 6.99e-12   NR KAF6020733.1 10212 g2682 i0 37.8 0.954545454545455 98 57 95.5 1 4 297 225 318 KAF6020733.1 ERLIN2 [Bugula neritina] diamond 294 70.9 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Bugulidae Bugula Bugula neritina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;