RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where bioproject = "PRJNA564810", tax_clade = "Opisthokonta" and tax_phylum = "Porifera"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 11 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 11 ✖

bioproject 1

  • PRJNA564810 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12033306 12033306 PRJNA564810_S_NODE_6990_length_223_cov_2.151899_g6968_i0 PRJNA564810 6990 223 2.151899 4.79873477 Corticium candelabrum 121492 Porifera other_Eukaryota 54.7 0.006   NTclustered gi|2664341338|ref|XM_062649286.1| 121492 g6968 i0 92.105 0.295964125560538 38 3 17 0 10 47 254 291 PREDICTED: Corticium candelabrum vesicle-associated membrane protein 3-like (LOC134181981), mRNA blastn 66 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
15856852 15856852 PRJNA564810_S_NODE_4733_length_258_cov_3.689119_g4711_i0 PRJNA564810 4733 258 3.689119 9.51792702 Metazoa 33208 Porifera other_Eukaryota 149 7.919999999999998e-42   NR XP_064396520.1 6063 g4711 i0 81.2 33.6976744186046 85 16 98.8 0 1 255 217 301 XP_064396520.1 deoxyribose-phosphate aldolase-like [Halichondria panicea] diamond 8694 150 0.993333333333333 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
15856867 15856867 PRJNA564810_S_NODE_993_length_405_cov_2.955882_g971_i0 PRJNA564810 993 405 2.955882 11.9713221 Oscarella lobularis 121494 Porifera other_Eukaryota 154 4.469999999999999e-42   NR XP_065833127.1 121494 g971 i0 63.4 2.24444444444444 101 37 74.8 0 13 315 332 432 XP_065833127.1 cathepsin L-like [Oscarella lobularis] diamond 909 154 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
26744507 26744507 PRJNA564810_S_NODE_2321_length_322_cov_3.626459_g2299_i0 PRJNA564810 2321 322 3.626459 11.67719798 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 99.4 1.19e-21   NR XP_064383636.1 6063 g2299 i0 60.8 2.76708074534162 74 27 68.9 2 4 225 497 568 XP_064383636.1 uncharacterized protein LOC135332200 [Halichondria panicea] diamond 891 100 0.994 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
27110748 27110748 PRJNA564810_S_NODE_4382_length_265_cov_1.115000_g4360_i0 PRJNA564810 4382 265 1.115 2.95475 Sycon ciliatum 27933 Porifera other_Eukaryota 52 4.3e-6   NR XP_065192085.1 27933 g4360 i0 65 2.7622641509434 40 14 45.3 0 265 146 76 115 XP_065192085.1 sterol carrier protein 2-like [Sycon ciliatum] diamond 732 52 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
28924509 28924509 PRJNA564810_S_NODE_5288_length_248_cov_2.967213_g5266_i0 PRJNA564810 5288 248 2.967213 7.35868824 Opisthokonta 33154 Porifera other_Eukaryota 43.9 0.0149   NR XP_062513089.1 121492 g5266 i0 39.5 2.85483870967742 38 23 46 0 100 213 310 347 XP_062513089.1 uncharacterized protein LOC134188898 [Corticium candelabrum] diamond 708 44.3 0.99097065462754 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
29745335 29745335 PRJNA564810_S_NODE_5810_length_240_cov_1.942857_g5788_i0 PRJNA564810 5810 240 1.942857 4.6628568 Metazoa 33208 Porifera other_Eukaryota 74.7 1.86e-13   NR XP_064383757.1 6063 g5788 i0 58.6 1.45 58 23 72.5 1 240 67 380 436 XP_064383757.1 protein dcd1B-like [Halichondria panicea] diamond 348 74.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
30016231 30016231 PRJNA564810_S_NODE_4291_length_267_cov_2.529703_g4269_i0 PRJNA564810 4291 267 2.529703 6.75430701 Halichondria panicea 6063 Porifera other_Eukaryota 42.7 0.0492   NR XP_064384579.1 6063 g4269 i0 40.4 0.584269662921348 52 30 57.3 1 267 115 341 392 XP_064384579.1 uncharacterized protein LOC135333537 isoform X2 [Halichondria panicea] diamond 156 42.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
30142123 30142123 PRJNA564810_S_NODE_7372_length_219_cov_1.928571_g7350_i0 PRJNA564810 7372 219 1.928571 4.22357049 Oscarella lobularis 121494 Porifera other_Eukaryota 42 0.0448   NR XP_065840894.1 121494 g7350 i0 30.2 0.726027397260274 53 37 72.6 0 219 61 166 218 XP_065840894.1 exosome complex component RRP41-like [Oscarella lobularis] diamond 159 42 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
31248338 31248338 PRJNA564810_S_NODE_2815_length_304_cov_3.481172_g2793_i0 PRJNA564810 2815 304 3.481172 10.58276288 Geodia barretti 519541 Porifera other_Eukaryota 116 1.1300000000000002e-27   NR CAI8026889.1 519541 g2793 i0 53.8 1.04605263157895 106 40 98.7 3 302 3 676 778 CAI8026889.1 Carboxypeptidase A2 [Geodia barretti] diamond 318 116 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Geodiidae Geodia Geodia barretti
32243086 32243086 PRJNA564810_S_NODE_2678_length_309_cov_2.229508_g2656_i0 PRJNA564810 2678 309 2.229508 6.88917972 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.5 4.42e-15   NR XP_065840747.1 121494 g2656 i0 47.7 2.58252427184466 86 42 82.5 3 307 53 616 699 XP_065840747.1 uncharacterized protein [Oscarella lobularis] diamond 798 80.5 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;