RNAquarium Metadata Server
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contig_metadata

16 rows where bioproject = "PRJNA564013" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA564013 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13303285 13303285 PRJNA564013_P_NODE_220051_length_287_cov_7.619469_g217200_i0 PRJNA564013 220051 287 7.619469 21.86787603 Adineta vaga complex sp. A JFF-2016 1813164 Rotifera other_Eukaryota 396 1.06e-105   NTclustered gi|1005055512|gb|KU860655.1| 1813164 g217200 i0 94.882 55.8118466898955 254 12 89 1 11 264 2114 1862 Adineta vaga complex sp. A JFF-2016 isolate H001 28S ribosomal RNA gene, partial sequence blastn 16018 396 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. A JFF-2016
21534931 21534931 PRJNA564013_P_NODE_373377_length_174_cov_5.725664_g370525_i0 PRJNA564013 373377 174 5.725664 9.96265536 Adineta 104781 Rotifera other_Eukaryota 274 2.87e-69   NTclustered gi|72153731|gb|DQ089739.1| 104782 g370525 i0 99.338 24.367816091954 151 1 87 0 24 174 1955 2105 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 4240 274 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
26681435 26681435 PRJNA564013_P_NODE_230361_length_278_cov_4.308756_g227509_i0 PRJNA564013 230361 278 4.308756 11.97834168 Rotaria 231623 Rotifera other_Eukaryota 123 1.59e-30   NR CAF3708103.1 392032 g227509 i0 77.4 9.06474820143885 84 19 90.6 0 278 27 101 184 CAF3708103.1 unnamed protein product [Rotaria socialis] diamond 2520 124 0.991935483870968 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis
26952543 26952543 PRJNA564013_P_NODE_353602_length_196_cov_2.755556_g350750_i0 PRJNA564013 353602 196 2.755556 5.40088976 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 42.7 0.00995   NR CAF0787208.1 104777 g350750 i0 75 0.428571428571429 28 7 42.9 0 112 195 91 118 CAF0787208.1 unnamed protein product [Brachionus calyciflorus] diamond 84 42.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
27584726 27584726 PRJNA564013_P_NODE_225984_length_282_cov_3.647059_g223133_i0 PRJNA564013 225984 282 3.647059 10.28470638 Adineta steineri 433720 Rotifera other_Eukaryota 56.2 1.06e-6   NR CAF3830914.1 433720 g223133 i0 57.1 0.893617021276596 42 18 44.7 0 178 53 321 362 CAF3830914.1 unnamed protein product, partial [Adineta steineri] diamond 252 56.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
28089898 28089898 PRJNA564013_P_NODE_279265_length_239_cov_2.960674_g276413_i0 PRJNA564013 279265 239 2.960674 7.07601086 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 114 1.33e-27   NR CAF2074576.1 392030 g276413 i0 61.8 4.49372384937239 89 14 86.6 1 226 20 389 477 CAF2074576.1 unnamed protein product [Rotaria magnacalcarata] diamond 1074 114 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
28451223 28451223 PRJNA564013_P_NODE_197506_length_308_cov_9.684211_g194655_i0 PRJNA564013 197506 308 9.684211 29.82736988 Rotaria 231623 Rotifera other_Eukaryota 43.5 0.0429   NR CAF2087824.1 392030 g194655 i0 52.8 1.05194805194805 36 17 35.1 0 94 201 369 404 CAF2087824.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 324 43.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
29429601 29429601 PRJNA564013_P_NODE_286169_length_234_cov_4.069364_g283317_i0 PRJNA564013 286169 234 4.069364 9.52231176 Eurotatoria 2816136 Rotifera other_Eukaryota 128 5.5299999999999996e-34   NR CAF1342213.1 433720 g283317 i0 88.6 9.87179487179487 70 8 89.7 0 234 25 248 317 CAF1342213.1 unnamed protein product [Adineta steineri] diamond 2310 129 0.992248062015504 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
29921462 29921462 PRJNA564013_P_NODE_219571_length_288_cov_2.255507_g216720_i0 PRJNA564013 219571 288 2.255507 6.49586016 Adineta vaga 104782 Rotifera other_Eukaryota 53.9 4.94e-6   NR UJR34022.1 104782 g216720 i0 47.1 3.36458333333333 68 35 69.8 1 264 64 161 228 UJR34022.1 hypothetical protein I4U23_021436 [Adineta vaga] diamond 969 53.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
30142102 30142102 PRJNA564013_P_NODE_72212_length_475_cov_31.251208_g69398_i0 PRJNA564013 72212 475 31.251208 148.443238 Adineta steineri 433720 Rotifera other_Eukaryota 44.7 0.0305   NR CAF1415493.1 433720 g69398 i0 33.7 0.543157894736842 86 47 54.3 3 472 215 29 104 CAF1415493.1 unnamed protein product [Adineta steineri] diamond 258 44.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
31533211 31533211 PRJNA564013_P_NODE_278716_length_239_cov_7.623596_g275864_i0 PRJNA564013 278716 239 7.623596 18.22039444 Rotaria sordida 392033 Rotifera other_Eukaryota 63.9 1.18e-9   NR CAF0935257.1 392033 g275864 i0 47 0.828451882845188 66 34 81.6 1 18 212 98 163 CAF0935257.1 unnamed protein product [Rotaria sordida] diamond 198 63.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
31564836 31564836 PRJNA564013_P_NODE_12276_length_1007_cov_12.543340_g10458_i0 PRJNA564013 12276 1007 12.54334 126.3114338 Rotaria sordida 392033 Rotifera other_Eukaryota 135 1.2499999999999998e-32   NR CAF3564471.1 392033 g10458 i0 41.6 3.49453823237339 173 82 51.5 1 475 993 72 225 CAF3564471.1 unnamed protein product [Rotaria sordida] diamond 3519 135 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
32007552 32007552 PRJNA564013_P_NODE_83898_length_443_cov_5.795812_g81069_i0 PRJNA564013 83898 443 5.795812 25.67544716 Adineta vaga 104782 Rotifera other_Eukaryota 105 3.1399999999999995e-23   NR UJR15369.1 104782 g81069 i0 52.3 5.06546275395034 132 47 88.7 5 2 394 729 845 UJR15369.1 hypothetical protein I4U23_002317 [Adineta vaga] diamond 2244 105 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
32545643 32545643 PRJNA564013_P_NODE_329499_length_209_cov_0.878378_g326647_i0 PRJNA564013 329499 209 0.878378 1.83581002 Rotaria socialis 392032 Rotifera other_Eukaryota 112 5.24e-29   NR CAF3362276.1 392032 g326647 i0 71 2.97129186602871 69 20 99 0 207 1 79 147 CAF3362276.1 unnamed protein product [Rotaria socialis] diamond 621 112 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis
32608491 32608491 PRJNA564013_P_NODE_39260_length_618_cov_13.298025_g36561_i0 PRJNA564013 39260 618 13.298025 82.1817945 Rotaria sordida 392033 Rotifera other_Eukaryota 149 1.1499999999999999e-42   NR CAF0885578.1 392033 g36561 i0 82.4 0.868932038834951 91 16 44.2 0 47 319 19 109 CAF0885578.1 unnamed protein product [Rotaria sordida] diamond 537 149 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
32702818 32702818 PRJNA564013_P_NODE_220340_length_287_cov_4.026549_g217489_i0 PRJNA564013 220340 287 4.026549 11.55619563 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 49.7 2.29e-4   NR CAF0707513.1 104777 g217489 i0 30.1 1.93379790940767 93 36 97.2 1 282 4 534 597 CAF0707513.1 unnamed protein product [Brachionus calyciflorus] diamond 555 49.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;