RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA564013", tax_phylum = "Nanobdellota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nanobdellota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA564013 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28532126 28532126 PRJNA564013_P_NODE_20207_length_819_cov_5.019789_g17944_i0 PRJNA564013 20207 819 5.019789 41.11207191 Nanobdellota archaeon 2026764 Archaea Archaea 53.1 1.82e-4   NR MEA3430203.1 2026764 g17944 i0 33.7 0.315018315018315 86 47 31.5 2 383 640 104 179 MEA3430203.1 hypothetical protein [Nanoarchaeota archaeon] diamond 258 53.1 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29605157 29605157 PRJNA564013_P_NODE_151490_length_350_cov_5.003460_g148641_i0 PRJNA564013 151490 350 5.00346 17.51211 Nanobdellota archaeon 2026764 Archaea Archaea 80.5 7.35e-15   NR MEK6849460.1 2026764 g148641 i0 42.2 0.874285714285714 102 52 84.9 3 27 323 135 232 MEK6849460.1 fibronectin type III domain-containing protein [Nanoarchaeota archaeon] diamond 306 80.5 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29699840 29699840 PRJNA564013_P_NODE_289210_length_232_cov_4.649123_g286358_i0 PRJNA564013 289210 232 4.649123 10.78596536 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 110 1.5e-28   NR MDD4878740.1 2910166 g286358 i0 68.9 1.79741379310345 74 21 93.1 1 227 12 21 94 MDD4878740.1 signal peptidase I [Candidatus Nanoarchaeia archaeon] diamond 417 110 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;