RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA564013" and tax_phylum = "Lenarviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA564013 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6927886 6927886 PRJNA564013_P_NODE_254906_length_257_cov_4.484694_g252054_i0 PRJNA564013 254906 257 4.484694 11.52566358 Ripathur virus 3131462 Viruses Viruses 150 8.06e-32   NTclustered gi|2717322585|gb|PP173764.1| 3131462 g252054 i0 90.991 0.431906614785992 111 10 43 0 127 237 218 328 MAG: Ripathur virus isolate RCCP2_k141_225201 genomic sequence blastn 111 150 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripathur virus
8205850 8205850 PRJNA564013_P_NODE_81667_length_448_cov_37.095607_g78841_i0 PRJNA564013 81667 448 37.095607 166.18831936 Penoulivirus alphaplasmoparae 2956285 Viruses Viruses 368 3.79e-97   NTclustered gi|2500381422|ref|NC_076811.1| 2686556 g78841 i0 88.704 1.63616071428571 301 34 83 0 90 390 3320 3020 Plasmopara viticola lesion associated ourmia-like virus 82 isolate DMS4_33408 RNA dependent RNA polymerase (QKR87_gp1) gene, partial cds blastn 733 368 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Penoulivirus Penoulivirus alphaplasmoparae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;