RNAquarium Metadata Server
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contig_metadata

21 rows where bioproject = "PRJNA564013" and tax_phylum = "Kitrinoviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 21 ✖

tax_kingdom 1

bioproject 1

  • PRJNA564013 · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4375559 4375559 PRJNA564013_P_NODE_170264_length_333_cov_10.966912_g167414_i0 PRJNA564013 170264 333 10.966912 36.51981696 Jujube closterovirus 1 3043313 Viruses Viruses 52.8 0.031   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g167414 i0 100 0.0840840840840841 28 0 8 0 306 333 35 8 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
4376266 4376266 PRJNA564013_P_NODE_203944_length_302_cov_7.771784_g201093_i0 PRJNA564013 203944 302 7.771784 23.47078768 Galium odoratum potexvirus 2738917 Viruses Viruses 503 6.459999999999998e-138   NTclustered gi|1845309154|gb|MN814316.1| 2738917 g201093 i0 99.281 21.135761589404 278 2 92 0 3 280 436 159 Galium odoratum potexvirus strain pt040-lat-5, complete genome blastn 6383 503 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Galium odoratum potexvirus
4377588 4377588 PRJNA564013_P_NODE_273044_length_243_cov_15.571429_g270192_i0 PRJNA564013 273044 243 15.571429 37.83857247 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.006   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g270192 i0 100 0.119341563786008 29 0 12 0 215 243 36 8 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
4378910 4378910 PRJNA564013_P_NODE_341164_length_203_cov_5.577465_g338312_i0 PRJNA564013 341164 203 5.577465 11.32225395 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g338312 i0 100 0.142857142857143 29 0 14 0 1 29 15 43 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
5656763 5656763 PRJNA564013_P_NODE_85345_length_439_cov_20.804233_g82515_i0 PRJNA564013 85345 439 20.804233 91.33058287 Potexvirus trifolii 3433859 Viruses Viruses 560 5.7e-155   NTclustered gi|2520252303|gb|OQ993368.1| 12188 g82515 i0 91.063 27.879271070615 414 37 94 0 1 414 5835 5422 White clover mosaic virus isolate DSMZ PV-1074, complete genome blastn 12239 560 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
10756650 10756650 PRJNA564013_P_NODE_47789_length_569_cov_14.954724_g45039_i0 PRJNA564013 47789 569 14.954724 85.09237956 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.004   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g45039 i0 92.5 0.070298769771529 40 1 7 2 488 527 43 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 40 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
12027497 12027497 PRJNA564013_P_NODE_180130_length_324_cov_25.551331_g177280_i0 PRJNA564013 180130 324 25.551331 82.78631244 Tobamovirus tabaci 3432891 Viruses Viruses 481 3.28e-131   NTclustered gi|388240165|emb|HE818420.1| 12242 g177280 i0 97.518 86.9506172839506 282 6 87 1 19 299 1040 759 Tobacco mosaic virus isolate Fengcheng, complete genome blastn 28172 481 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
12028733 12028733 PRJNA564013_P_NODE_243870_length_266_cov_7.921951_g241018_i0 PRJNA564013 243870 266 7.921951 21.07238966 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.024   NTclustered gi|1995060321|gb|MN450069.1| 12164 g241018 i0 100 0.105263157894737 28 0 11 0 239 266 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
12029963 12029963 PRJNA564013_P_NODE_309650_length_219_cov_5.398734_g306798_i0 PRJNA564013 309650 219 5.398734 11.82322746 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.001   NTclustered gi|1995060321|gb|MN450069.1| 12164 g306798 i0 96.97 0.150684931506849 33 1 15 0 20 52 14 46 Carnation latent virus isolate KL, complete genome blastn 33 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
12030956 12030956 PRJNA564013_P_NODE_359850_length_191_cov_23.023077_g356998_i0 PRJNA564013 359850 191 23.023077 43.97407707 Potexvirus pepini 3433856 Viruses Viruses 311 2.45e-80   NTclustered gi|375808845|gb|JN835466.1| 112229 g356998 i0 100 81.9057591623037 168 0 88 0 24 191 6245 6412 Pepino mosaic virus strain CH2, complete genome blastn 15644 311 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
13886690 13886690 PRJNA564013_P_NODE_342691_length_203_cov_0.915493_g339839_i0 PRJNA564013 342691 203 0.915493 1.85845079 Potexvirus 12176 Viruses Viruses 230 7.61e-56   NTclustered gi|2426915758|dbj|LC613009.1| 167132 g339839 i0 87.562 1.98029556650246 201 22 98 2 6 203 272 72 Tulip virus X Vi genomic RNA, complete genome blastn 402 230 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecstulipae
15853794 15853794 PRJNA564013_P_NODE_316573_length_215_cov_4.415584_g313721_i0 PRJNA564013 316573 215 4.415584 9.4935056 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.019   NTclustered gi|1995060321|gb|MN450069.1| 12164 g313721 i0 100 0.130232558139535 28 0 13 0 1 28 15 42 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
18398612 18398612 PRJNA564013_P_NODE_114295_length_389_cov_20.490854_g111453_i0 PRJNA564013 114295 389 20.490854 79.70942206 Jujube closterovirus 1 3043313 Viruses Viruses 52.8 0.037   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g111453 i0 100 0.0719794344473008 28 0 7 0 1 28 8 35 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
18404730 18404730 PRJNA564013_P_NODE_69475_length_484_cov_9.966903_g66664_i0 PRJNA564013 69475 484 9.966903 48.23981052 Potexvirus flavitrifolii 3433843 Viruses Viruses 749 0   NTclustered gi|2217161454|gb|OL584354.1| 12177 g66664 i0 96.078 11.1611570247934 459 18 95 0 4 462 7015 6557 Clover yellow mosaic virus isolate DSMZ PV-0851 genomic sequence blastn 5402 749 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus flavitrifolii
22226678 22226678 PRJNA564013_P_NODE_243738_length_266_cov_13.629268_g240886_i0 PRJNA564013 243738 266 13.629268 36.25385288 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.007   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g240886 i0 100 0.214285714285714 29 0 11 0 238 266 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
22228536 22228536 PRJNA564013_P_NODE_341218_length_203_cov_5.021127_g338366_i0 PRJNA564013 341218 203 5.021127 10.19288781 Potexvirus trifolii 3433859 Viruses Viruses 209 9.92e-50   NTclustered gi|2520252303|gb|OQ993368.1| 12188 g338366 i0 87.363 0.896551724137931 182 23 90 0 22 203 5658 5839 White clover mosaic virus isolate DSMZ PV-1074, complete genome blastn 182 209 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
23500035 23500035 PRJNA564013_P_NODE_151059_length_350_cov_14.269896_g148210_i0 PRJNA564013 151059 350 14.269896 49.944636 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.033   NTclustered gi|1995060321|gb|MN450069.1| 12164 g148210 i0 100 0.08 28 0 8 0 323 350 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
23504342 23504342 PRJNA564013_P_NODE_371099_length_177_cov_8.724138_g368247_i0 PRJNA564013 371099 177 8.724138 15.44172426 Jujube closterovirus 1 3043313 Viruses Viruses 52.8 0.015   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g368247 i0 100 0.15819209039548 28 0 16 0 1 28 8 35 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
24779024 24779024 PRJNA564013_P_NODE_75320_length_466_cov_5.703704_g72499_i0 PRJNA564013 75320 466 5.703704 26.57926064 Jujube closterovirus 1 3043313 Viruses Viruses 52.8 0.045   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g72499 i0 100 0.0600858369098712 28 0 6 0 30 57 34 7 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
25358925 25358925 PRJNA564013_P_NODE_297860_length_227_cov_1.078313_g295008_i0 PRJNA564013 297860 227 1.078313 2.44777051 Potexvirus 12176 Viruses Viruses 276 1.1e-69   NTclustered gi|2426915758|dbj|LC613009.1| 167132 g295008 i0 89.45 1.92070484581498 218 23 96 0 1 218 3692 3475 Tulip virus X Vi genomic RNA, complete genome blastn 436 276 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecstulipae
26889667 26889667 PRJNA564013_P_NODE_344801_length_202_cov_1.382979_g341949_i0 PRJNA564013 344801 202 1.382979 2.79361758 Tymovirales sp. 1955157 Viruses Viruses 88.2 2.17e-18   NR XCO49695.1 1955157 g341949 i0 69.5 3.53465346534653 59 18 87.6 0 201 25 1669 1727 XCO49695.1 MAG: putative ORF1 protein [Tymovirales sp.] diamond 714 88.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Tymovirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;