RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA564013" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA564013 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28184433 28184433 PRJNA564013_P_NODE_255666_length_256_cov_26.179487_g252814_i0 PRJNA564013 255666 256 26.179487 67.01948672 Rozella allomycis CSF55 988480 Fungi Fungi 56.6 5.78e-7   NR EPZ34396.1 988480 g252814 i0 33.3 0.84375 72 48 84.4 0 226 11 633 704 EPZ34396.1 GPCR, family 3 domain-containing protein [Rozella allomycis CSF55] diamond 216 56.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31944012 31944012 PRJNA564013_P_NODE_185317_length_320_cov_2.969112_g182467_i0 PRJNA564013 185317 320 2.969112 9.5011584 Rozella allomycis CSF55 988480 Fungi Fungi 72.8 2e-12   NR RKP19184.1 988480 g182467 i0 59.2 0.928125 49 20 45.9 0 254 108 313 361 RKP19184.1 hypothetical protein ROZALSC1DRAFT_29188 [Rozella allomycis CSF55] diamond 297 72.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;