RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA564013", tax_phylum = "Candidatus Micrarchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Candidatus Micrarchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA564013 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26667513 26667513 PRJNA564013_P_NODE_99141_length_411_cov_12.685714_g96307_i0 PRJNA564013 99141 411 12.685714 52.13828454 Candidatus Anstonellales archaeon 3058027 Archaea Archaea 132 1.37e-32   NR MEM3373103.1 3058027 g96307 i0 76.5 0.62043795620438 85 20 62 0 156 410 800 884 MEM3373103.1 hypothetical protein [Candidatus Anstonellales archaeon] diamond 255 132 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Anstonellales     Candidatus Anstonellales archaeon
27995303 27995303 PRJNA564013_P_NODE_23045_length_775_cov_16.320728_g20681_i0 PRJNA564013 23045 775 16.320728 126.485642 Candidatus Micrarchaeia archaeon 3018267 Archaea Archaea 261 4.14e-80   NR MFA6489230.1 3018267 g20681 i0 58 0.940645161290323 243 92 94.1 3 752 24 247 479 MFA6489230.1 FAD-dependent thymidylate synthase [Candidatus Micrarchaeia archaeon] diamond 729 261 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia       Candidatus Micrarchaeia archaeon
31121538 31121538 PRJNA564013_P_NODE_335415_length_206_cov_1.979310_g332563_i0 PRJNA564013 335415 206 1.97931 4.0773786 Candidatus Anstonella stagnisolia 2885744 Archaea Archaea 74.3 1.54e-13   NR VVB57918.1 2885744 g332563 i0 78.3 0.669902912621359 46 10 67 0 23 160 377 422 VVB57918.1 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [Candidatus Anstonella stagnisolia] diamond 138 74.3 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Anstonellales Candidatus Anstonellaceae Candidatus Anstonella Candidatus Anstonella stagnisolia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;