RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA564013" and tax_phylum = "Candidatus Calescibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Calescibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA564013 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31059039 31059039 PRJNA564013_P_NODE_232555_length_276_cov_5.334884_g229703_i0 PRJNA564013 232555 276 5.334884 14.72427984 Candidatus Calescibacterium sp. 2972667 Bacteria Bacteria 84 1.73e-16   NR MCS7243132.1 2972667 g229703 i0 56.1 2.68478260869565 82 36 89.1 0 9 254 68 149 MCS7243132.1 hypothetical protein [Candidatus Calescibacterium sp.] diamond 741 84 1 Bacteria Bacteria candidate phyla   Candidatus Calescibacteriota       Candidatus Calescibacterium Candidatus Calescibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;