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contig_metadata

23 rows where bioproject = "PRJNA564013" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 23 ✖

bioproject 1

  • PRJNA564013 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1828684 1828684 PRJNA564013_P_NODE_96422_length_416_cov_8.081690_g93589_i0 PRJNA564013 96422 416 8.08169 33.6198304 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 730 0   NTclustered gi|937513727|gb|CP012850.1| 1353260 g93589 i0 98.554 0.997596153846154 415 3 99 3 5 416 1649352 1649766 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 415 730 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
5656775 5656775 PRJNA564013_P_NODE_86125_length_437_cov_42.335106_g83295_i0 PRJNA564013 86125 437 42.335106 185.00441322 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 197 4.41e-58   NR HEY7108885.1 2169593 g83295 i0 84.8 0.768878718535469 112 17 76.9 0 9 344 351 462 HEY7108885.1 ABC transporter permease [Nitrososphaeraceae archaeon] diamond 336 197 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
12032224 12032224 PRJNA564013_P_NODE_91110_length_426_cov_33.493151_g88277_i0 PRJNA564013 91110 426 33.493151 142.68082326 Nitrosarchaeum sp. 2026886 Archaea Archaea 57 6.82e-8   NR MDW7641988.1 2026886 g88277 i0 53.2 0.330985915492958 47 17 29.6 1 196 321 16 62 MDW7641988.1 hypothetical protein [Nitrosarchaeum sp.] diamond 141 57 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
18405069 18405069 PRJNA564013_P_NODE_87635_length_434_cov_9.983914_g84805_i0 PRJNA564013 87635 434 9.983914 43.33018676 Candidatus Methanomethylicaceae archaeon 2282146 Archaea Archaea 148 1.32e-39   NR MEM4204517.1 3058293 g84805 i0 82 0.615207373271889 89 16 61.5 0 277 11 76 164 MEM4204517.1 hypothetical protein [Candidatus Methanomethylicaceae archaeon] diamond 267 148 1 Archaea   Thermoproteati Candidatus Methanomethylicota Candidatus Methanomethylicia Candidatus Methanomethylicales Candidatus Methanomethylicaceae   Candidatus Methanomethylicaceae archaeon
20949281 20949281 PRJNA564013_P_NODE_134357_length_367_cov_1.447712_g131509_i0 PRJNA564013 134357 367 1.447712 5.31310304 Pyrobaculum aerophilum 13773 Archaea Archaea 610 4.59e-170   NTclustered gi|18308975|gb|AE009441.1| 178306 g131509 i0 99.405 1.41961852861035 336 2 92 0 16 351 92718 93053 Pyrobaculum aerophilum str. IM2, complete genome blastn 521 610 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
21533861 21533861 PRJNA564013_P_NODE_198257_length_308_cov_2.020243_g195406_i0 PRJNA564013 198257 308 2.020243 6.22234844 Saccharolobus 2100760 Archaea Archaea 52.8 0.029   NTclustered gi|1496296112|gb|CP011055.2| 2287 g195406 i0 100 1.27272727272727 28 0 9 0 237 264 1111878 1111851 Saccharolobus solfataricus strain SARC-B chromosome, complete genome blastn 392 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Saccharolobus Saccharolobus solfataricus
26858146 26858146 PRJNA564013_P_NODE_67861_length_489_cov_14.885514_g65055_i0 PRJNA564013 67861 489 14.885514 72.79016346 Candidatus Methanomethylicaceae archaeon 2282146 Archaea Archaea 221 3.05e-65   NR MEM4204518.1 3058293 g65055 i0 75 0.858895705521472 140 35 85.9 0 424 5 1 140 MEM4204518.1 ribonuclease HIII [Candidatus Methanomethylicaceae archaeon] diamond 420 221 1 Archaea   Thermoproteati Candidatus Methanomethylicota Candidatus Methanomethylicia Candidatus Methanomethylicales Candidatus Methanomethylicaceae   Candidatus Methanomethylicaceae archaeon
26889624 26889624 PRJNA564013_P_NODE_156501_length_345_cov_33.873239_g153652_i0 PRJNA564013 156501 345 33.873239 116.86267455 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 85.9 2.31e-18   NR MCW3981605.1 2026714 g153652 i0 82.7 1.80869565217391 52 9 45.2 0 324 169 118 169 MCW3981605.1 transcription initiation factor IIB [Candidatus Bathyarchaeota archaeon] diamond 624 85.9 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
27142066 27142066 PRJNA564013_P_NODE_182062_length_323_cov_2.648855_g179212_i0 PRJNA564013 182062 323 2.648855 8.55580165 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 55.5 3.1e-6   NR MCJ7767095.1 2026714 g179212 i0 31.6 0.882352941176471 95 60 84.5 2 323 51 236 329 MCJ7767095.1 DUF2341 domain-containing protein [Candidatus Bathyarchaeota archaeon] diamond 285 55.5 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
27237273 27237273 PRJNA564013_P_NODE_49023_length_563_cov_21.523904_g46269_i0 PRJNA564013 49023 563 21.523904 121.17957952 Nitrososphaerota archaeon 2026795 Archaea Archaea 103 1.06e-21   NR MEM4674760.1 2026795 g46269 i0 51.9 0.55417406749556 104 45 54.4 4 3 308 974 1074 MEM4674760.1 hypothetical protein [Nitrososphaerota archaeon] diamond 312 103 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
27805978 27805978 PRJNA564013_P_NODE_32424_length_671_cov_4.344262_g29811_i0 PRJNA564013 32424 671 4.344262 29.14999802 Candidatus Caldarchaeum sp. 2972665 Archaea Archaea 350 5.499999999999999e-117   NR MEM1953505.1 2972665 g29811 i0 95.8 0.858420268256334 192 5 84.5 1 671 105 244 435 MEM1953505.1 O-antigen ligase family protein [Candidatus Caldarchaeum sp.] diamond 576 350 1 Archaea   Thermoproteati Nitrososphaerota   Candidatus Caldarchaeales Candidatus Caldarchaeaceae Candidatus Caldarchaeum Candidatus Caldarchaeum sp.
28089871 28089871 PRJNA564013_P_NODE_175325_length_329_cov_3.257463_g172475_i0 PRJNA564013 175325 329 3.257463 10.71705327 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 180 4.1199999999999996e-54   NR MDW0209989.1 2169593 g172475 i0 96.8 3.42857142857143 94 3 85.7 0 305 24 29 122 MDW0209989.1 toprim domain-containing protein [Nitrososphaeraceae archaeon] diamond 1128 180 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
28469052 28469052 PRJNA564013_P_NODE_50166_length_558_cov_6.851107_g47411_i0 PRJNA564013 50166 558 6.851107 38.22917706 Candidatus Caldarchaeum sp. 2972665 Archaea Archaea 113 8.75e-26   NR MEM1953505.1 2972665 g47411 i0 75.6 0.462365591397849 86 15 46.2 1 259 2 32 111 MEM1953505.1 O-antigen ligase family protein [Candidatus Caldarchaeum sp.] diamond 258 113 1 Archaea   Thermoproteati Nitrososphaerota   Candidatus Caldarchaeales Candidatus Caldarchaeaceae Candidatus Caldarchaeum Candidatus Caldarchaeum sp.
28766722 28766722 PRJNA564013_P_NODE_160407_length_342_cov_5.530249_g157557_i0 PRJNA564013 160407 342 5.530249 18.91345158 root 1 Root_unresolved Root_unresolved 79 7.37e-17   NR WP_238027530.1 99938 g157557 i0 97.5 0.701754385964912 40 1 35.1 0 321 202 23 62 WP_238027530.1 hypothetical protein, partial [Metallosphaera javensis (ex Hofmann et al. 2022)] diamond 240 79 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Metallosphaera Metallosphaera javensis (ex Hofmann et al. 2022)
29100413 29100413 PRJNA564013_P_NODE_285248_length_235_cov_2.137931_g282396_i0 PRJNA564013 285248 235 2.137931 5.02413785 Nitrososphaerales archaeon 2268197 Archaea Archaea 42.4 0.0408   NR MEM2338583.1 2268197 g282396 i0 47.1 0.434042553191489 34 18 43.4 0 198 97 105 138 MEM2338583.1 SLC13 family permease [Nitrososphaerales archaeon] diamond 102 42.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
29163747 29163747 PRJNA564013_P_NODE_45789_length_579_cov_7.725869_g43046_i0 PRJNA564013 45789 579 7.725869 44.73278151 Nitrososphaerota archaeon 2026795 Archaea Archaea 220 1.01e-68   NR MEM3063177.1 2026795 g43046 i0 51.7 2.08290155440414 201 87 99 1 7 579 23 223 MEM3063177.1 eukaryotic translation initiation factor 4E [Nitrososphaerota archaeon] diamond 1206 220 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
29257919 29257919 PRJNA564013_P_NODE_105849_length_401_cov_3.558824_g103011_i0 PRJNA564013 105849 401 3.558824 14.270884240000001 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 220 1.24e-70   NR HET7243038.1 2169593 g103011 i0 98.1 1.571072319202 105 2 78.6 0 401 87 100 204 HET7243038.1 DUF5996 family protein [Nitrososphaeraceae archaeon] diamond 630 220 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
29636719 29636719 PRJNA564013_P_NODE_47890_length_569_cov_4.641732_g45139_i0 PRJNA564013 47890 569 4.641732 26.41145508 Thermoproteota archaeon 2056631 Archaea Archaea 330 2.1599999999999993e-110   NR MEM3368591.1 2056631 g45139 i0 95.4 0.917398945518453 174 8 91.7 0 563 42 201 374 MEM3368591.1 PhoH family protein [Thermoproteota archaeon] diamond 522 330 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
30047468 30047468 PRJNA564013_P_NODE_23751_length_765_cov_28.349432_g21360_i0 PRJNA564013 23751 765 28.349432 216.8731548 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 120 2.02e-27   NR MEM0489409.1 3045160 g21360 i0 49.6 0.513725490196078 131 59 49 3 735 361 317 446 MEM0489409.1 AAA family ATPase [Candidatus Bathyarchaeia archaeon] diamond 393 120 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
30869073 30869073 PRJNA564013_P_NODE_43174_length_594_cov_2.378987_g40444_i0 PRJNA564013 43174 594 2.378987 14.13118278 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 110 2.52e-28   NR HEY9388019.1 2169593 g40444 i0 85.5 0.277777777777778 55 8 27.8 0 538 374 1 55 HEY9388019.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 165 110 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31437968 31437968 PRJNA564013_P_NODE_169016_length_334_cov_13.901099_g166166_i0 PRJNA564013 169016 334 13.901099 46.42967066 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 180 8.29e-53   NR HZD35164.1 2169593 g166166 i0 85.1 2.68562874251497 101 15 90.7 0 313 11 294 394 HZD35164.1 adenosylhomocysteinase [Nitrososphaeraceae archaeon] diamond 897 180 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32608446 32608446 PRJNA564013_P_NODE_192600_length_313_cov_3.996032_g189749_i0 PRJNA564013 192600 313 3.996032 12.50758016 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 93.6 2.99e-21   NR HEU4468027.1 2169593 g189749 i0 91.5 1.31309904153355 47 4 45 0 151 291 135 181 HEU4468027.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 411 93.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32608512 32608512 PRJNA564013_P_NODE_91400_length_426_cov_5.284932_g88567_i0 PRJNA564013 91400 426 5.284932 22.51381032 Nitrososphaerota archaeon 2026795 Archaea Archaea 72.8 8.08e-12   NR MDE1830603.1 2026795 g88567 i0 39.4 0.964788732394366 137 76 93.7 4 408 10 1 134 MDE1830603.1 hypothetical protein [Nitrososphaerota archaeon] diamond 411 72.8 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;