RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA564013", tax_kingdom = "Shotokuvirae" and tax_phylum = "Cressdnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 2 ✖

tax_kingdom 1

  • Shotokuvirae · 2 ✖

bioproject 1

  • PRJNA564013 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12028273 12028273 PRJNA564013_P_NODE_218890_length_288_cov_7.977974_g216039_i0 PRJNA564013 218890 288 7.977974 22.97656512 Genomoviridae sp. 2202565 Viruses Viruses 508 1.32e-139   NTclustered gi|1832329449|gb|MT309899.1| 2202565 g216039 i0 99.288 5.47569444444444 281 2 98 0 6 286 1167 887 MAG: Genomoviridae sp. isolate 6402_233, complete genome blastn 1577 508 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
24084354 24084354 PRJNA564013_P_NODE_279859_length_239_cov_1.112360_g277007_i0 PRJNA564013 279859 239 1.11236 2.6585404 Gemykrogvirus 1985367 Viruses Viruses 442 1.0899999999999994e-119   NTclustered gi|746815432|ref|NC_026144.1| 1519399 g277007 i0 100 7 239 0 100 0 1 239 465 703 Sewage-associated gemycircularvirus-4 isolate BS3913, complete sequence blastn 1673 442 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemykrogvirus Gemykrogvirus sewopo1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;