RNAquarium Metadata Server
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contig_metadata

16 rows where bioproject = "PRJNA564013", tax_kingdom = "Shotokuvirae" and tax_phylum = "Cossaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 16 ✖

tax_kingdom 1

  • Shotokuvirae · 16 ✖

bioproject 1

  • PRJNA564013 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3098270 3098270 PRJNA564013_P_NODE_140403_length_360_cov_16.528428_g137555_i0 PRJNA564013 140403 360 16.528428 59.5023408 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.034   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g137555 i0 100 0.0777777777777778 28 0 8 0 1 28 3116 3089 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
3102690 3102690 PRJNA564013_P_NODE_357043_length_193_cov_13.393939_g354191_i0 PRJNA564013 357043 193 13.393939 25.85030227 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.017   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g354191 i0 100 0.145077720207254 28 0 15 0 166 193 3089 3116 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
4379919 4379919 PRJNA564013_P_NODE_59764_length_517_cov_29.625000_g56974_i0 PRJNA564013 59764 517 29.625 153.16125 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.014   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g56974 i0 100 0.0560928433268859 29 0 6 0 1 29 3116 3088 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 29 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
6929857 6929857 PRJNA564013_P_NODE_356646_length_194_cov_2.511278_g353794_i0 PRJNA564013 356646 194 2.511278 4.87187932 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.017   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g353794 i0 100 0.144329896907216 28 0 14 0 167 194 28 1 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
8199390 8199390 PRJNA564013_P_NODE_107147_length_399_cov_5.446746_g104308_i0 PRJNA564013 107147 399 5.446746 21.73251654 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.038   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g104308 i0 100 0.0701754385964912 28 0 7 0 1 28 3116 3089 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
8199746 8199746 PRJNA564013_P_NODE_122027_length_380_cov_9.103448_g119182_i0 PRJNA564013 122027 380 9.103448 34.5931024 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.036   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g119182 i0 100 0.0736842105263158 28 0 7 0 1 28 3115 3088 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
9481648 9481648 PRJNA564013_P_NODE_99088_length_411_cov_16.988571_g96254_i0 PRJNA564013 99088 411 16.988571 69.82302681 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.039   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g96254 i0 100 0.0681265206812652 28 0 7 0 1 28 1 28 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
10753756 10753756 PRJNA564013_P_NODE_232589_length_276_cov_4.986047_g229737_i0 PRJNA564013 232589 276 4.986047 13.76148972 Betapapillomavirus 1 337051 Viruses Viruses 422 1.68e-113   NTclustered gi|1200175664|gb|KY969593.1| 31547 g229737 i0 97.561 1.78260869565217 246 6 89 0 22 267 5782 5537 Human papillomavirus 20 strain HPV-20/Lancaster/2015, complete genome blastn 492 422 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 1
10754591 10754591 PRJNA564013_P_NODE_277449_length_240_cov_6.318436_g274597_i0 PRJNA564013 277449 240 6.318436 15.1642464 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.022   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g274597 i0 96.875 0.133333333333333 32 0 13 1 210 240 3085 3116 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 32 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
12025954 12025954 PRJNA564013_P_NODE_119850_length_383_cov_2.913043_g117006_i0 PRJNA564013 119850 383 2.913043 11.15695469 Betapapillomavirus 2 333924 Viruses Viruses 636 7.929999999999998e-178   NTclustered gi|186461194|gb|EU410348.1| 518629 g117006 i0 99.153 0.924281984334204 354 2 92 1 14 367 3754 3402 Human papillomavirus type 110, complete genome blastn 354 636 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 2
14576240 14576240 PRJNA564013_P_NODE_136352_length_364_cov_21.960396_g133504_i0 PRJNA564013 136352 364 21.960396 79.93584144 Gammapapillomavirus 12 1513257 Viruses Viruses 534 2.8099999999999996e-147   NTclustered gi|409183149|gb|JX444072.1| 1315266 g133504 i0 100 4.52197802197802 289 0 79 0 53 341 1266 978 Human papillomavirus type 165 isolate KC7, complete genome blastn 1646 534 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Gammapapillomavirus Gammapapillomavirus 12
15853583 15853583 PRJNA564013_P_NODE_305633_length_222_cov_1.664596_g302781_i0 PRJNA564013 305633 222 1.664596 3.69540312 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.005   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g302781 i0 100 0.130630630630631 29 0 13 0 2 30 3 31 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 29 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
15853842 15853842 PRJNA564013_P_NODE_319693_length_213_cov_14.480263_g316841_i0 PRJNA564013 319693 213 14.480263 30.84296019 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.005   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g316841 i0 100 0.136150234741784 29 0 14 0 1 29 2 30 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 29 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
18401246 18401246 PRJNA564013_P_NODE_22675_length_780_cov_8.657858_g20326_i0 PRJNA564013 22675 780 8.657858 67.5312924 Gammapapillomavirus 12 1513257 Viruses Viruses 1332 0   NTclustered gi|409183149|gb|JX444072.1| 1315266 g20326 i0 99.454 2.82179487179487 733 4 94 0 26 758 3455 2723 Human papillomavirus type 165 isolate KC7, complete genome blastn 2201 1332 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Gammapapillomavirus Gammapapillomavirus 12
23501844 23501844 PRJNA564013_P_NODE_234899_length_274_cov_4.812207_g232047_i0 PRJNA564013 234899 274 4.812207 13.18544718 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.007   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g232047 i0 96.875 0.116788321167883 32 1 12 0 243 274 3085 3116 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 32 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
31374976 31374976 PRJNA564013_P_NODE_273976_length_243_cov_2.197802_g271124_i0 PRJNA564013 273976 243 2.197802 5.34065886 Betapolyomavirus macacae 1891767 Viruses Viruses 50.1 9.48e-5   NR AAK29054.1 1891767 g271124 i0 57.1 0.432098765432099 35 15 43.2 0 125 229 503 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 105 50.1 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;