RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA564013", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA564013 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27377779 27377779 PRJNA564013_P_NODE_359103_length_192_cov_3.625954_g356251_i0 PRJNA564013 359103 192 3.625954 6.96183168 Fungi 4751 Fungi Fungi 57.4 1.26e-7   NR KAF7684310.1 164912 g356251 i0 65.1 2.015625 43 15 67.2 0 42 170 335 377 KAF7684310.1 Glycine--tRNA ligase [Astathelohania contejeani] diamond 387 57.8 0.993079584775087 Eukaryota Opisthokonta Fungi Microsporidia     Astathelohaniidae Astathelohania Astathelohania contejeani
28247662 28247662 PRJNA564013_P_NODE_268766_length_246_cov_21.713514_g265914_i0 PRJNA564013 268766 246 21.713514 53.41524444 Edhazardia aedis USNM 41457 1003232 Fungi Fungi 99.4 1.5100000000000001e-22   NR EJW04559.1 1003232 g265914 i0 63 0.890243902439024 73 26 87.8 1 24 239 159 231 EJW04559.1 hypothetical protein EDEG_01242 [Edhazardia aedis USNM 41457] diamond 219 99.4 1 Eukaryota Opisthokonta Fungi Microsporidia     Culicosporidae Edhazardia Edhazardia aedis
28342572 28342572 PRJNA564013_P_NODE_53226_length_544_cov_11.163561_g50462_i0 PRJNA564013 53226 544 11.163561 60.72977184 Edhazardia aedis USNM 41457 1003232 Fungi Fungi 162 2.06e-42   NR EJW05209.1 1003232 g50462 i0 48.5 0.909926470588235 165 75 89.9 2 47 535 657 813 EJW05209.1 hypothetical protein EDEG_00674 [Edhazardia aedis USNM 41457] diamond 495 162 1 Eukaryota Opisthokonta Fungi Microsporidia     Culicosporidae Edhazardia Edhazardia aedis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;