RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA564013", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 7 ✖

tax_kingdom 1

  • Bacillati · 7 ✖

bioproject 1

  • PRJNA564013 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27837222 27837222 PRJNA564013_P_NODE_280684_length_238_cov_2.954802_g277832_i0 PRJNA564013 280684 238 2.954802 7.03242876 Candidatus Xenobia bacterium 3036772 Bacteria Bacteria 46.6 7.35e-4   NR HEY4001695.1 3036772 g277832 i0 65.5 0.365546218487395 29 10 36.6 0 220 134 134 162 HEY4001695.1 cytochrome c3 family protein [Candidatus Xenobia bacterium] diamond 87 46.6 1 Bacteria   Bacillati Vulcanimicrobiota Candidatus Xenobia       Candidatus Xenobia bacterium
27900330 27900330 PRJNA564013_P_NODE_270585_length_245_cov_5.010870_g267733_i0 PRJNA564013 270585 245 5.01087 12.2766315 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 89 6e-19   NR MFA7484040.1 3107663 g267733 i0 77.6 0.6 49 11 60 0 228 82 238 286 MFA7484040.1 glycosyltransferase [Vulcanimicrobiota bacterium] diamond 147 89 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
28974182 28974182 PRJNA564013_P_NODE_360308_length_191_cov_4.984615_g357456_i0 PRJNA564013 360308 191 4.984615 9.52061465 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 88.6 7.78e-19   NR MFA5508600.1 3107663 g357456 i0 82.7 0.816753926701571 52 9 81.7 0 2 157 336 387 MFA5508600.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) [Vulcanimicrobiota bacterium] diamond 156 88.6 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
29132070 29132070 PRJNA564013_P_NODE_346449_length_201_cov_2.457143_g343597_i0 PRJNA564013 346449 201 2.457143 4.93885743 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 67.4 5.61e-12   NR MFA5506647.1 3107663 g343597 i0 85.3 0.507462686567164 34 5 50.7 0 3 104 137 170 MFA5506647.1 dCTP deaminase [Vulcanimicrobiota bacterium] diamond 102 67.4 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
30553022 30553022 PRJNA564013_P_NODE_197933_length_308_cov_3.919028_g195082_i0 PRJNA564013 197933 308 3.919028 12.07060624 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 70.9 1.03e-11   NR MFA5504202.1 3107663 g195082 i0 72.3 0.457792207792208 47 12 45.8 1 307 167 500 545 MFA5504202.1 energy-dependent translational throttle protein EttA [Vulcanimicrobiota bacterium] diamond 141 70.9 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
31406621 31406621 PRJNA564013_P_NODE_70456_length_481_cov_5.430952_g67644_i0 PRJNA564013 70456 481 5.430952 26.12287912 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 155 6.53e-42   NR MFA7480402.1 3107663 g67644 i0 55 0.873180873180873 140 63 87.3 0 462 43 70 209 MFA7480402.1 hypothetical protein [Vulcanimicrobiota bacterium] diamond 420 155 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
32418901 32418901 PRJNA564013_P_NODE_31679_length_677_cov_11.147727_g29090_i0 PRJNA564013 31679 677 11.147727 75.47011179 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 135 5.259999999999999e-37   NR MFA7482074.1 3107663 g29090 i0 63.5 0.460856720827179 104 38 46.1 0 130 441 1 104 MFA7482074.1 rhodanese-like domain-containing protein [Vulcanimicrobiota bacterium] diamond 312 135 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;