RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA564013", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA564013 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27219230 27219230 PRJNA564013_P_NODE_211082_length_295_cov_28.658120_g208231_i0 PRJNA564013 211082 295 28.65812 84.541454 PVC group 1783257 Bacteria Bacteria 95.9 2.2799999999999994e-23   NR HSS17369.1 2052315 g208231 i0 95.7 3.27457627118644 46 2 46.8 0 161 24 1 46 HSS17369.1 pseudouridine synthase [Candidatus Dormiibacterota bacterium] diamond 966 96.3 0.995846313603323 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
30300851 30300851 PRJNA564013_P_NODE_134232_length_367_cov_2.911765_g131384_i0 PRJNA564013 134232 367 2.911765 10.68617755 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 154 6.86e-41   NR HLH67845.1 2052315 g131384 i0 57.3 0.899182561307902 110 47 89.9 0 15 344 495 604 HLH67845.1 N,N-dimethylformamidase beta subunit family domain-containing protein [Candidatus Dormiibacterota bacterium] diamond 330 154 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;