RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA564013", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA564013 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28374033 28374033 PRJNA564013_P_NODE_202706_length_303_cov_15.057851_g199855_i0 PRJNA564013 202706 303 15.057851 45.62528853 Lentisphaerota bacterium 1932692 Bacteria Bacteria 125 2e-31   NR NLX27278.1 1932692 g199855 i0 63 0.910891089108911 92 34 91.1 0 288 13 11 102 NLX27278.1 hypothetical protein [Lentisphaerota bacterium] diamond 276 125 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
31533173 31533173 PRJNA564013_P_NODE_107996_length_398_cov_3.038576_g105156_i0 PRJNA564013 107996 398 3.038576 12.09353248 Lentisphaeria bacterium 2053569 Bacteria Bacteria 219 4.44e-63   NR MFA6930009.1 2053569 g105156 i0 83.2 0.942211055276382 125 21 94.2 0 398 24 1125 1249 MFA6930009.1 right-handed parallel beta-helix repeat-containing protein [Lentisphaeria bacterium] diamond 375 219 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;